ID D7M1V4_ARALL Unreviewed; 179 AA.
AC D7M1V4;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=Sphingolipid delta4-desaturase N-terminal domain-containing protein {ECO:0000259|SMART:SM01269};
GN ORFNames=ARALYDRAFT_911754 {ECO:0000313|EMBL:EFH48978.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348718; EFH48978.1; -; Genomic_DNA.
DR RefSeq; XP_002872719.1; XM_002872673.1.
DR AlphaFoldDB; D7M1V4; -.
DR STRING; 81972.D7M1V4; -.
DR EnsemblPlants; scaffold_603811.1; scaffold_603811.1; scaffold_603811.1.
DR Gramene; scaffold_603811.1; scaffold_603811.1; scaffold_603811.1.
DR eggNOG; KOG2987; Eukaryota.
DR HOGENOM; CLU_032156_2_1_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042284; F:sphingolipid delta-4 desaturase activity; IEA:EnsemblPlants.
DR GO; GO:0030148; P:sphingolipid biosynthetic process; IEA:EnsemblPlants.
DR InterPro; IPR005804; FA_desaturase_dom.
DR InterPro; IPR013866; Sphingolipid_d4-desaturase_N.
DR PANTHER; PTHR12879; SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2; 1.
DR PANTHER; PTHR12879:SF8; SPHINGOLIPID DELTA(4)-DESATURASE DES1; 1.
DR Pfam; PF00487; FA_desaturase; 1.
DR Pfam; PF08557; Lipid_DES; 1.
DR SMART; SM01269; Lipid_DES; 1.
PE 4: Predicted;
KW Lipid metabolism {ECO:0000256|ARBA:ARBA00023098};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 1..38
FT /note="Sphingolipid delta4-desaturase N-terminal"
FT /evidence="ECO:0000259|SMART:SM01269"
SQ SEQUENCE 179 AA; 20889 MW; 8EA22EB8508FFE5E CRC64;
MATDFFWSYT DEPHASRRRQ IPYRYPQIRQ LFGPDPWAFL KIALVVILQL STAAILHNSG
WLKILAIGSF LNHNLFLAIH ELSHNLAFST PVYNRWLGIF ANLPIGVPMS VTFQKYHLEH
HEHYVFNPNQ ETYSYYGPLN LLTWGVGYHN EHHEFPRIPG NKLHLVKEIA GEYYEGLES
//
