ID D7M4A5_ARALL Unreviewed; 272 AA.
AC D7M4A5;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN ORFNames=ARALYDRAFT_350357 {ECO:0000313|EMBL:EFH49784.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348718; EFH49784.1; -; Genomic_DNA.
DR RefSeq; XP_002873525.1; XM_002873479.1.
DR AlphaFoldDB; D7M4A5; -.
DR EnsemblPlants; fgenesh1_pg.C_scaffold_6000950; fgenesh1_pg.C_scaffold_6000950; fgenesh1_pg.C_scaffold_6000950.
DR GeneID; 9309593; -.
DR Gramene; fgenesh1_pg.C_scaffold_6000950; fgenesh1_pg.C_scaffold_6000950; fgenesh1_pg.C_scaffold_6000950.
DR KEGG; aly:9309593; -.
DR eggNOG; ENOG502RZA9; Eukaryota.
DR HOGENOM; CLU_037984_2_2_1; -.
DR OrthoDB; 140984at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR007527; Znf_SWIM.
DR InterPro; IPR039903; Zswim2.
DR PANTHER; PTHR21540:SF0; E3 UBIQUITIN-PROTEIN LIGASE ZSWIM2; 1.
DR PANTHER; PTHR21540; RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2; 1.
DR Pfam; PF04434; SWIM; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 59..89
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 272 AA; 30590 MW; 9C11E15316E06201 CRC64;
MESVGSNQIS PFVSNRDQRH FFAQPVADRI LRALRHRIRL LHRPNAGTFH VLGATCNVYT
VTLMATPTCT CPDRKKPCKH ILFVLIRVLG IPLDDKCLRQ RRLRPCLLFR LFSAPTRPDC
LASFRLQQRF LQLFSAATSQ PGYTTNASST SKMENEADEE PATCPICLDD IDATKNVNGE
NGGGEEKEIV VVKCRVCKNK VHEECMLAWR RSRGRRPGIC VVCRARWPAN RSSKNPNVGG
NYENCHGNCY LNLAPYVDEE VEDGVGTSQR PC
//
