ID D7M7W9_ARALL Unreviewed; 407 AA.
AC D7M7W9;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 08-NOV-2023, entry version 58.
DE SubName: Full=60S ribosomal protein L4/L1 {ECO:0000313|EMBL:EFH47254.1};
GN ORFNames=ARALYDRAFT_487065 {ECO:0000313|EMBL:EFH47254.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC {ECO:0000256|ARBA:ARBA00010528}.
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DR EMBL; GL348718; EFH47254.1; -; Genomic_DNA.
DR RefSeq; XP_002870995.1; XM_002870949.1.
DR AlphaFoldDB; D7M7W9; -.
DR STRING; 81972.D7M7W9; -.
DR EnsemblPlants; fgenesh2_kg.6__199__AT5G02870.1; fgenesh2_kg.6__199__AT5G02870.1; fgenesh2_kg.6__199__AT5G02870.1.
DR Gramene; fgenesh2_kg.6__199__AT5G02870.1; fgenesh2_kg.6__199__AT5G02870.1; fgenesh2_kg.6__199__AT5G02870.1.
DR eggNOG; KOG1475; Eukaryota.
DR HOGENOM; CLU_026535_3_0_1; -.
DR OrthoDB; 275636at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0042788; C:polysomal ribosome; IEA:EnsemblPlants.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:EnsemblPlants.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.40.1370.10; -; 1.
DR InterPro; IPR025755; Ribos_uL4_C_dom.
DR InterPro; IPR002136; Ribosomal_uL4.
DR InterPro; IPR023574; Ribosomal_uL4_dom_sf.
DR InterPro; IPR013000; Ribosomal_uL4_euk/arc_CS.
DR InterPro; IPR045240; Ribosomal_uL4_euk/arch.
DR PANTHER; PTHR19431; 60S RIBOSOMAL PROTEIN L4; 1.
DR PANTHER; PTHR19431:SF0; 60S RIBOSOMAL PROTEIN L4; 1.
DR Pfam; PF14374; Ribos_L4_asso_C; 1.
DR Pfam; PF00573; Ribosomal_L4; 1.
DR SUPFAM; SSF52166; Ribosomal protein L4; 1.
DR PROSITE; PS00939; RIBOSOMAL_L1E; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000313|EMBL:EFH47254.1}.
FT DOMAIN 282..354
FT /note="Large ribosomal subunit protein uL4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14374"
FT REGION 57..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 344..371
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 57..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 407 AA; 44882 MW; D4019B70CC665496 CRC64;
MVASAAARPL VTVQCLDGDM STDQSTTVTL PDVMTAPVRP DIVNFVHAQI SNNSRQPYAV
SKKAGHQTSA ESWGTGRAVS RIPRVPGGGT HRAGQAAFGN MCRGGRMFAP TKIWRRWHRR
VNVNMKRHAI VSAIAATAVP ALVMARGHKI ENVPEMPLVV SDSAEAVEKT SAAIKVLKQI
GAYDDAEKAK NSIGIRPGKG KMRNRRYISR KGPLVVYGTE GAKIVKAFRN LPGVELCHVE
RLNLLKLAPG GHLGRFVIWT KSAFDKLESI YGSFEKPSEK KKGYVLPRSK MLNADLARII
NSDEVQSVVN PIKKDAKRAV LKKNPLKNFN VMLKLNPYAK TAKRMSLLAE AQRVKAKKEK
LEKKRKVVTK DEAQAIKAAG KAWYQTMISD SDYTEFDNFT KWLGASQ
//
