ID D7MBZ4_ARALL Unreviewed; 314 AA.
AC D7MBZ4;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=HSF-type DNA-binding domain-containing protein {ECO:0000259|SMART:SM00415};
GN ORFNames=ARALYDRAFT_914977 {ECO:0000313|EMBL:EFH44327.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the HSF family. {ECO:0000256|RuleBase:RU004020}.
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DR EMBL; GL348719; EFH44327.1; -; Genomic_DNA.
DR RefSeq; XP_002868068.1; XM_002868022.1.
DR AlphaFoldDB; D7MBZ4; -.
DR STRING; 81972.D7MBZ4; -.
DR EnsemblPlants; scaffold_702719.1; scaffold_702719.1; scaffold_702719.1.
DR GeneID; 9304140; -.
DR Gramene; scaffold_702719.1; scaffold_702719.1; scaffold_702719.1.
DR KEGG; aly:9304140; -.
DR eggNOG; KOG0627; Eukaryota.
DR HOGENOM; CLU_886667_0_0_1; -.
DR OrthoDB; 694875at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR000232; HSF_DNA-bd.
DR InterPro; IPR027725; HSF_fam.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10015; HEAT SHOCK TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR10015:SF464; HEAT STRESS TRANSCRIPTION FACTOR A-4B; 1.
DR Pfam; PF00447; HSF_DNA-bind; 2.
DR PRINTS; PR00056; HSFDOMAIN.
DR SMART; SM00415; HSF; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Stress response {ECO:0000256|ARBA:ARBA00023016}.
FT DOMAIN 7..99
FT /note="HSF-type DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00415"
FT DOMAIN 167..259
FT /note="HSF-type DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00415"
SQ SEQUENCE 314 AA; 36851 MW; CDE9F6123EDCC117 CRC64;
MDYGRNVISD FLKKAYELVD DPSTDSIISW SPNGLSFVVL KPLECSRDLL TRRLQITNFS
PFQSYGFRKI DISPGQELEF ACDDFVRGKP ELLDKIAQRY LARLKAYHDS KYGELDKRLK
SATTREEYEL AIKEHREKWE RESRDRKART RVTSTIPYQD FAFGRNDIFD FLKKAYALVD
DPSTDSIVSW APNGLSFVVW QPLEFTKDLL PRHLQITHFA KFHTYGFSKL VISSGQQLEF
MCNDFVRGKP ELLDKIAQRY VARMKDTELW KIDERLENAT SKEEYDLAMK DKEEMFARKS
KERKAIMATR RKST
//
