ID D7MDT3_ARALL Unreviewed; 479 AA.
AC D7MDT3;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=ARALYDRAFT_913766 {ECO:0000313|EMBL:EFH43746.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348719; EFH43746.1; -; Genomic_DNA.
DR RefSeq; XP_002867487.1; XM_002867441.1.
DR AlphaFoldDB; D7MDT3; -.
DR EnsemblPlants; scaffold_701508.1; scaffold_701508.1; scaffold_701508.1.
DR Gramene; scaffold_701508.1; scaffold_701508.1; scaffold_701508.1.
DR eggNOG; KOG1075; Eukaryota.
DR HOGENOM; CLU_044650_0_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR002156; RNaseH_domain.
DR PANTHER; PTHR47074; BNAC02G40300D PROTEIN; 1.
DR PANTHER; PTHR47074:SF72; REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 359..466
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 479 AA; 52020 MW; 79F98740EC134428 CRC64;
MTPFPLSFSS HSRPFPKLSV SFLDLRPPTA PPTERPSPST PPEPPDLRFR VLYGVSYAQP
PLAAVSSLFI APIPSPSLDL SSLCVSPVAA FFALLQAAIK VSASDCLGGD LQSFTALCSG
VQTPSIVPTA ILPSVPPGSL VVVIRFLAFA VNSWDWFGLV QPCVSLCDRY VAFPCAPTAV
GISWVGFVMN CVCTWIQTGS LPNGQPRPSW ALLSIYMTSE GLVFVTLCYG LHRPSNSLLL
VPNYLSMRIY QFQVPHYEDV FKYDQNLVRM VVRSPKGWHF VRQPLEIIIS GFGFDLKSAG
SRESVGVLSV VDGLCARLGF TEENICVIKS QLIQPPPQKM EVFLSFSEAA WFQSKIFCGL
GWCFKDPLNG KIHHGSFSRP FVLSVLVAEA LALKAAFMAA LALGVSRLAC ISDCRELVLL
SNTGGHANEL DGILADFDLF RSMFLSTFVH FVPRSENYGT EALANASLLS CIFSSIGGV
//
