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Database: UniProt
Entry: D7MKK3_ARALL
LinkDB: D7MKK3_ARALL
Original site: D7MKK3_ARALL 
ID   D7MKK3_ARALL            Unreviewed;       510 AA.
AC   D7MKK3;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 62.
DE   RecName: Full=MADS-box domain-containing protein {ECO:0000259|PROSITE:PS50066};
GN   ORFNames=ARALYDRAFT_357809 {ECO:0000313|EMBL:EFH42367.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; GL348720; EFH42367.1; -; Genomic_DNA.
DR   RefSeq; XP_002866108.1; XM_002866062.1.
DR   AlphaFoldDB; D7MKK3; -.
DR   STRING; 81972.D7MKK3; -.
DR   EnsemblPlants; fgenesh1_pg.C_scaffold_8001596; fgenesh1_pg.C_scaffold_8001596; fgenesh1_pg.C_scaffold_8001596.
DR   Gramene; fgenesh1_pg.C_scaffold_8001596; fgenesh1_pg.C_scaffold_8001596; fgenesh1_pg.C_scaffold_8001596.
DR   eggNOG; KOG0014; Eukaryota.
DR   HOGENOM; CLU_534606_0_0_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd00266; MADS_SRF_like; 1.
DR   Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR   InterPro; IPR033897; MADS_SRF-like.
DR   InterPro; IPR002100; TF_MADSbox.
DR   InterPro; IPR036879; TF_MADSbox_sf.
DR   PANTHER; PTHR11945; MADS BOX PROTEIN; 1.
DR   PANTHER; PTHR11945:SF176; MADS-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00319; SRF-TF; 1.
DR   SMART; SM00432; MADS; 1.
DR   SUPFAM; SSF55455; SRF-like; 1.
DR   PROSITE; PS50066; MADS_BOX_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          1..57
FT                   /note="MADS-box"
FT                   /evidence="ECO:0000259|PROSITE:PS50066"
SQ   SEQUENCE   510 AA;  55027 MW;  5BCCBBC35C41C3C5 CRC64;
     MVKMVKIMNE KTRITTYKKR KACLYKKASE FSTLCGVDTC LIVYGPSRAG DEMVAEPELW
     PKDERKVREI ITKYRDTVSS NCTKTYTVQE CLEKNNTKEE KPKIAMEYPT WDKKLDKCSL
     NDLYLVFMAV ENKIQEATNR NQTFPDTTCW SNDQLGLCGY NQQCFEQYQL FPLPTMEHNG
     FSFFPFNNQM TSNTAEVASF SNVTEPMIAN GQNLFYGSCS DGPYGPVVQR TAYMEPIQWG
     LGNSVFNNVK QFQDYPFRFA QVNDLEDSRN ISGVLAGVDG ILRVVIGDVG AISGVSAVTG
     AWFDGAVAGD SVEVVGLIVG ADIGDFTGIV VGGETREVAG VETGVVAVVG EETGEVAGDK
     TGEFKGDAMV RDVTGEVAGD ETGDFNGEEI VRDETGDVAG VKAGVRDGEA AGVNTRDFDG
     DSTVRDGEIA GVITGDIKGD VMVRDVTGEV TGETTGYFDG VTNAGEETED FSGDFVGEVC
     FVGGGSSGGF WITGGCKVGV RGDVDGEITR
//
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