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Database: UniProt
Entry: D7MM88_ARALL
LinkDB: D7MM88_ARALL
Original site: D7MM88_ARALL 
ID   D7MM88_ARALL            Unreviewed;       462 AA.
AC   D7MM88;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   22-FEB-2023, entry version 62.
DE   SubName: Full=Predicted protein {ECO:0000313|EMBL:EFH42433.1};
GN   ORFNames=ARALYDRAFT_685323 {ECO:0000313|EMBL:EFH42433.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; GL348720; EFH42433.1; -; Genomic_DNA.
DR   RefSeq; XP_002866174.1; XM_002866128.1.
DR   AlphaFoldDB; D7MM88; -.
DR   STRING; 81972.D7MM88; -.
DR   EnsemblPlants; Al_scaffold_0008_2143; Al_scaffold_0008_2143; Al_scaffold_0008_2143.
DR   Gramene; Al_scaffold_0008_2143; Al_scaffold_0008_2143; Al_scaffold_0008_2143.
DR   eggNOG; ENOG502QUVA; Eukaryota.
DR   HOGENOM; CLU_024717_1_0_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   CDD; cd11393; bHLH_AtbHLH_like; 1.
DR   Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR   InterPro; IPR044658; bHLH92/bHLH041-like.
DR   InterPro; IPR045239; bHLH95_bHLH.
DR   InterPro; IPR011598; bHLH_dom.
DR   InterPro; IPR036638; HLH_DNA-bd_sf.
DR   PANTHER; PTHR46665:SF1; SPERMATOGENESIS- AND OOGENESIS-SPECIFIC BASIC HELIX-LOOP-HELIX-CONTAINING PROTEIN 1; 1.
DR   PANTHER; PTHR46665; TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED; 1.
DR   Pfam; PF00010; HLH; 1.
DR   SMART; SM00353; HLH; 1.
DR   SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR   PROSITE; PS50888; BHLH; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          285..334
FT                   /note="BHLH"
FT                   /evidence="ECO:0000259|PROSITE:PS50888"
FT   REGION          109..130
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          259..288
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          324..358
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        264..288
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   462 AA;  52245 MW;  90CDAA996BCE3068 CRC64;
     MMHLILSCSY LISMDGYYNE ASEEPSSSSS SGSLARSLFH EYRQSVIPLQ NGHVPSMAFM
     NNLPYVEIRP QEIQRLAFND AQRLFYQMKI EASLREWFPE DFNRKSSPVN SDYLRPPHHP
     SSSSSSLSPN NVSEYSSLLF PLIPKPSTTT EAVNVPVLPP LAPVNMIHQQ QQEPLFRNRE
     REEEAMTKAI LAVLTGPSSP PSTSSSPQRK RRATAFNRYY SMISGHGRAP LPSLRKQSMM
     KRAISFYNRL NIYQRERFTR ENATTHGEGS GGSSGGGRYT SGPSATQLHH MISERKRREK
     LNESFQALRS LLPPGTKKDK ASVLSIAREQ LSSLQGEISK LLERNRKLEA KLAGERDIIN
     DLLPNERFNV HISHISESTS RERILDLRVV LRGDSIRVDD LMIRLLEFLK QINNVSLVSI
     EARTRARDTS VVLVSLRLKI EGECDESAFQ EAVRRVVADL AH
//
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