ID D7MM88_ARALL Unreviewed; 462 AA.
AC D7MM88;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 22-FEB-2023, entry version 62.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EFH42433.1};
GN ORFNames=ARALYDRAFT_685323 {ECO:0000313|EMBL:EFH42433.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; GL348720; EFH42433.1; -; Genomic_DNA.
DR RefSeq; XP_002866174.1; XM_002866128.1.
DR AlphaFoldDB; D7MM88; -.
DR STRING; 81972.D7MM88; -.
DR EnsemblPlants; Al_scaffold_0008_2143; Al_scaffold_0008_2143; Al_scaffold_0008_2143.
DR Gramene; Al_scaffold_0008_2143; Al_scaffold_0008_2143; Al_scaffold_0008_2143.
DR eggNOG; ENOG502QUVA; Eukaryota.
DR HOGENOM; CLU_024717_1_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd11393; bHLH_AtbHLH_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR044658; bHLH92/bHLH041-like.
DR InterPro; IPR045239; bHLH95_bHLH.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR46665:SF1; SPERMATOGENESIS- AND OOGENESIS-SPECIFIC BASIC HELIX-LOOP-HELIX-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR46665; TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 285..334
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 109..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 259..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 324..358
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 264..288
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 462 AA; 52245 MW; 90CDAA996BCE3068 CRC64;
MMHLILSCSY LISMDGYYNE ASEEPSSSSS SGSLARSLFH EYRQSVIPLQ NGHVPSMAFM
NNLPYVEIRP QEIQRLAFND AQRLFYQMKI EASLREWFPE DFNRKSSPVN SDYLRPPHHP
SSSSSSLSPN NVSEYSSLLF PLIPKPSTTT EAVNVPVLPP LAPVNMIHQQ QQEPLFRNRE
REEEAMTKAI LAVLTGPSSP PSTSSSPQRK RRATAFNRYY SMISGHGRAP LPSLRKQSMM
KRAISFYNRL NIYQRERFTR ENATTHGEGS GGSSGGGRYT SGPSATQLHH MISERKRREK
LNESFQALRS LLPPGTKKDK ASVLSIAREQ LSSLQGEISK LLERNRKLEA KLAGERDIIN
DLLPNERFNV HISHISESTS RERILDLRVV LRGDSIRVDD LMIRLLEFLK QINNVSLVSI
EARTRARDTS VVLVSLRLKI EGECDESAFQ EAVRRVVADL AH
//