ID D7TCX8_VITVI Unreviewed; 770 AA.
AC D7TCX8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 08-NOV-2023, entry version 64.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN OrderedLocusNames=VIT_06s0080g00140 {ECO:0000313|EMBL:CBI28351.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI28351.3, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; FN595757; CBI28351.3; -; Genomic_DNA.
DR AlphaFoldDB; D7TCX8; -.
DR PaxDb; 29760-VIT_06s0080g00140-t01; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_0_1; -.
DR InParanoid; D7TCX8; -.
DR OMA; QPDTNYV; -.
DR Proteomes; UP000009183; Chromosome 6.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 157..191
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 258..292
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 360..395
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 463..497
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 678..770
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 770 AA; 85997 MW; 86E7D94C1F4A511D CRC64;
MFGVRQLGRS KRQKRFTQSL SGPYDVVFNP KTSLSSSKLS TLSHSQQLFD ETPQQGLSRN
NHLLFEFSRN DQNKEALNLF LGLRRSGSPT DGSSLSCVLK VCGCLFDRIV GKQVHCQCIK
CGFVEDVSVG TSLVDMYMKT ESVEDGERVF DEMRVKNVVS WTSLLAGYRQ NGLNEQALKL
FSQMQLEGIK PNPFTFAAVL GGLAADGAVE KGVQVHTMVI KSGLDSTIFV GNSMVNMYSK
SLMVSDAKAV FDSMENRNAV SWNSMIAGFV TNGLDLEAFE LFYRMRLEGV KLTQTIFATV
IKLCANIKEM SFAKQLHCQV IKNGSDFDLN IKTALMVAYS KCSEIDDAFK LFCMMHGVQN
VVSWTAIISG YVQNGRTDRA MNLFCQMRRE EGVEPNEFTF SSVLNACAAP TASVEQGKQF
HSCSIKSGFS NALCVSSALV TMYAKRGNIE SANEVFKRQV DRDLVSWNSM ISGYAQHGCG
KKSLKIFEEM RSKNLELDGI TFIGVISACT HAGLVNEGQR YFDLMVKDYH IVPTMEHYSC
MVDLYSRAGM LEKAMDLINK MPFPAGATIW RTLLAACRVH LNVQLGELAA EKLISLQPQD
SAAYVLLSNI YATAGNWQER AKVRKLMDMK KVKKEAGYSW IEVKNKTFSF MAGDLSHPQS
DRIYLKLEEL SIRLKDAGYY PDTKYVLHDV EEEHKEVILS QHSERLAIAF GLIATPPGTP
IQIVKNLRVC GDCHTVIKLI SKIEGRDIVV RDSNRFHHFK GGSCSCGDYW
//