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Database: UniProt
Entry: D7TCX8_VITVI
LinkDB: D7TCX8_VITVI
Original site: D7TCX8_VITVI 
ID   D7TCX8_VITVI            Unreviewed;       770 AA.
AC   D7TCX8;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-NOV-2023, entry version 64.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   OrderedLocusNames=VIT_06s0080g00140 {ECO:0000313|EMBL:CBI28351.3};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CBI28351.3, ECO:0000313|Proteomes:UP000009183};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA   Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA   Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA   Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA   Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA   Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA   Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA   Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA   Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA   Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA   Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in major
RT   angiosperm phyla.";
RL   Nature 449:463-467(2007).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   EMBL; FN595757; CBI28351.3; -; Genomic_DNA.
DR   AlphaFoldDB; D7TCX8; -.
DR   PaxDb; 29760-VIT_06s0080g00140-t01; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_0_1; -.
DR   InParanoid; D7TCX8; -.
DR   OMA; QPDTNYV; -.
DR   Proteomes; UP000009183; Chromosome 6.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR046849; Eplus_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF20430; Eplus_motif; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 3.
DR   PROSITE; PS51375; PPR; 4.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          157..191
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          258..292
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          360..395
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          463..497
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          678..770
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   770 AA;  85997 MW;  86E7D94C1F4A511D CRC64;
     MFGVRQLGRS KRQKRFTQSL SGPYDVVFNP KTSLSSSKLS TLSHSQQLFD ETPQQGLSRN
     NHLLFEFSRN DQNKEALNLF LGLRRSGSPT DGSSLSCVLK VCGCLFDRIV GKQVHCQCIK
     CGFVEDVSVG TSLVDMYMKT ESVEDGERVF DEMRVKNVVS WTSLLAGYRQ NGLNEQALKL
     FSQMQLEGIK PNPFTFAAVL GGLAADGAVE KGVQVHTMVI KSGLDSTIFV GNSMVNMYSK
     SLMVSDAKAV FDSMENRNAV SWNSMIAGFV TNGLDLEAFE LFYRMRLEGV KLTQTIFATV
     IKLCANIKEM SFAKQLHCQV IKNGSDFDLN IKTALMVAYS KCSEIDDAFK LFCMMHGVQN
     VVSWTAIISG YVQNGRTDRA MNLFCQMRRE EGVEPNEFTF SSVLNACAAP TASVEQGKQF
     HSCSIKSGFS NALCVSSALV TMYAKRGNIE SANEVFKRQV DRDLVSWNSM ISGYAQHGCG
     KKSLKIFEEM RSKNLELDGI TFIGVISACT HAGLVNEGQR YFDLMVKDYH IVPTMEHYSC
     MVDLYSRAGM LEKAMDLINK MPFPAGATIW RTLLAACRVH LNVQLGELAA EKLISLQPQD
     SAAYVLLSNI YATAGNWQER AKVRKLMDMK KVKKEAGYSW IEVKNKTFSF MAGDLSHPQS
     DRIYLKLEEL SIRLKDAGYY PDTKYVLHDV EEEHKEVILS QHSERLAIAF GLIATPPGTP
     IQIVKNLRVC GDCHTVIKLI SKIEGRDIVV RDSNRFHHFK GGSCSCGDYW
//
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