ID D8PI67_9BACT Unreviewed; 568 AA.
AC D8PI67;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN Name=recJ {ECO:0000313|EMBL:CBK42954.1};
GN ORFNames=NIDE3264 {ECO:0000313|EMBL:CBK42954.1};
OS Nitrospira defluvii.
OC Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae;
OC Nitrospira.
OX NCBI_TaxID=330214 {ECO:0000313|EMBL:CBK42954.1, ECO:0000313|Proteomes:UP000001660};
RN [1] {ECO:0000313|EMBL:CBK42954.1, ECO:0000313|Proteomes:UP000001660}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20624973; DOI=10.1073/pnas.1003860107;
RA Lucker S., Wagner M., Maixner F., Pelletier E., Koch H., Vacherie B.,
RA Rattei T., Sinninghe Damste J., Spieck E., Le Paslier D., Daims H.;
RT "A Nitrospira metagenome illuminates the physiology and evolution of
RT globally important nitrite-oxidizing bacteria.";
RL Proc. Natl. Acad. Sci. U.S.A. 0:13479-13484(2010).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
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DR EMBL; FP929003; CBK42954.1; -; Genomic_DNA.
DR AlphaFoldDB; D8PI67; -.
DR STRING; 330214.NIDE3264; -.
DR KEGG; nde:NIDE3264; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_2_0; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000001660; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CBK42954.1};
KW Hydrolase {ECO:0000313|EMBL:CBK42954.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000001660}.
FT DOMAIN 80..230
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 317..437
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 454..559
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT COILED 303..337
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 568 AA; 62312 MW; 85B4DE7509DA4CF6 CRC64;
MQEKLWVFRA ADRALQHTLS KQLSISPVTA SVLLARGVTT PDEATRWMSS VQGGLHDPFL
LPDMESAVER LHQALARQER VCFYGDYDVD GVSATSLYLS FYQGLGGNAC GYIPHRVREG
YGLNEGAVRR LAEEGISLLV TSDCGTTSHH EIAVARELGV DVIVTDHHQT DATMPAALAV
LNPHRRDAIY PFKGLCSAGL AYKVVSAYQQ RYGSGDVEPD SCLDLVALAT VADIVPLQDE
NRILVREGLT HITRGARAGI RALKQVAGIA KACTSETIGF RLGPRLNAAG RLDHAMLCVR
LLTTESDQEA MQIAEQLEQL NRQRQQIEEG ITREAATYLN QDEPAAAIVL GSRDWHLGVV
GIVAARLVDR FHRPSIVIAI DGQGRGKGSA RTVEGFNLYQ GLSECKDLLE AYGGHPSAAG
LTLKEARLEE FRRRFCEVAA QWAGGARTVP TLHVDAEVKL TDVNFDLIQE LESLHPFGAG
NPEPTLAVRG LDVVDARVVG EKHLKLRVRQ GRSFIFDSIG FRMGSFEELG LRANRPVDLA
FSPERNHWNG YDRVQLRIKA LRMSGEVS
//
