ID D8R1C6_SELML Unreviewed; 546 AA.
AC D8R1C6;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=Splicing factor Cactin {ECO:0000256|ARBA:ARBA00034534};
GN ORFNames=SELMODRAFT_230446 {ECO:0000313|EMBL:EFJ33529.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ33529.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC -!- SIMILARITY: Belongs to the CACTIN family.
CC {ECO:0000256|ARBA:ARBA00006895}.
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DR EMBL; GL377570; EFJ33529.1; -; Genomic_DNA.
DR RefSeq; XP_002964691.1; XM_002964645.1.
DR AlphaFoldDB; D8R1C6; -.
DR STRING; 88036.D8R1C6; -.
DR EnsemblPlants; EFJ33529; EFJ33529; SELMODRAFT_230446.
DR Gramene; EFJ33529; EFJ33529; SELMODRAFT_230446.
DR KEGG; smo:SELMODRAFT_230446; -.
DR eggNOG; KOG2370; Eukaryota.
DR HOGENOM; CLU_011759_1_0_1; -.
DR InParanoid; D8R1C6; -.
DR OMA; ARHEEDM; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005681; C:spliceosomal complex; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IBA:GO_Central.
DR InterPro; IPR019134; Cactin_C.
DR InterPro; IPR018816; Cactin_central.
DR PANTHER; PTHR21737:SF4; CACTIN; 1.
DR PANTHER; PTHR21737; POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3; 1.
DR Pfam; PF10312; Cactin_mid; 1.
DR Pfam; PF09732; CactinC_cactus; 1.
DR SMART; SM01050; CactinC_cactus; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 169..350
FT /note="Splicing factor cactin central"
FT /evidence="ECO:0000259|Pfam:PF10312"
FT DOMAIN 422..546
FT /note="Splicing factor Cactin C-terminal"
FT /evidence="ECO:0000259|Pfam:PF09732"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 362..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 129..175
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 546 AA; 63487 MW; 90A27373FEBF6560 CRC64;
MLNGSDIAAG DARDGSRGRK QQRPLPFLVK GEKASNQGPF GCVDLDERRR RKRGRVSQYT
EEEIHHYLVK KAQRKAAKVA KKLKPQLVSG YSDDSNPFGD SNLTEKFVWR KKIERDIASK
TLNLKDISVK AERVRQEEQM KEIEKVKKKR EERAMEKAKN EEEKAMLARE RARAEFQDWE
KKEEEFLFHQ RQVRAEIRIK EGRATKIDLL SKLDDLRMAE PYHIFKGLSV KEMEKLHEEL
RLHLELDRKN TEFWEAMTVV CDSELAERRK REAGACGGED NLVLDDAGLH TSIDLDVNTL
LQNMTSSQLQ EEQAKIEEKL RSGSAKIVEF WESVLKRVHV FKAKARLREI AMDLAQQHHE
ISSEKVEEAM APRSPEPIPR QAVRGDGIPE FERAELGKVE DGHAEFGSGA EVSVESDHVN
LWRDKYSPRK PKYLNRVHTG YEWNKYNQTH YDHDSPPPKT VQGYKFNIFY PDLIDCTKAP
TFAIERDGIS GDTAIIRFTA GAPYEDIAFR IVNKEWERSP KNGFKCTFER GILCVYFNFK
RYRYRR
//
