ID D8RJY9_SELML Unreviewed; 598 AA.
AC D8RJY9;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_95540 {ECO:0000313|EMBL:EFJ27140.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ27140.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377582; EFJ27140.1; -; Genomic_DNA.
DR RefSeq; XP_002971391.1; XM_002971345.1.
DR AlphaFoldDB; D8RJY9; -.
DR EnsemblPlants; EFJ27140; EFJ27140; SELMODRAFT_95540.
DR Gramene; EFJ27140; EFJ27140; SELMODRAFT_95540.
DR KEGG; smo:SELMODRAFT_95540; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; D8RJY9; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47928:SF204; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 92..126
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 190..224
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 261..295
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 506..598
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 598 AA; 66938 MW; B3B0993F682045F2 CRC64;
MALVLTVQVG LADNDKDLGQ ERFCSNTEAY AALLRRCANE RNLVDGKRVH EHLRRYGYEN
ETFLGNLLVQ MYGKCSSIDD AALAFDSIRK KDLFSWNIMI AAFAENGCLD RAVGVFELME
PARIKRNRGT FVAVLAAGLD LEQGKKIHDS VHSSGLERNE MVATALLSMY GACGSTDDAR
QVFEQVPKLD LVCWNAMITA YVQNDRGREA LEIFHRLEME GVKCNEVTYL AALDACACLA
VQSEGRSLHK RVSEAGLLLT SFKVANSLIN MYGKSGNLEA AEEIFESMPS RDISSWNVLL
TVYGHNGLGD LAVDRFTESC LEGFEPDSIT FLAVLQACSH AGLLDTGVEL LVSIQEDWGI
DPTQYHYLCV VDLLGRSGEL VRAEALINSM PFEPEEGAWR SLLGGCRVNS DVGRGERATQ
RLLVMSEDSS PYVLMANIYA SIRNFDLAER LRSVMADRNV KKQPGLSWIE VRGRIHTFAA
NDKLHARKEE IYAGLDRLFV ELQREGYRPD TRVALYDVEE EKKVRMLLHH SEKLAIMFGL
MSTPDGSPLF VLKNLRVCAD CHAATKIIAK ITKRKIVMRD ASRFHHFENG KCSCCDYW
//
