ID D8RQL5_SELML Unreviewed; 436 AA.
AC D8RQL5;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=SELMODRAFT_105564 {ECO:0000313|EMBL:EFJ22438.1},
GN SELMODRAFT_173175 {ECO:0000313|EMBL:EFJ25472.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ25472.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; GL377596; EFJ22438.1; -; Genomic_DNA.
DR EMBL; GL377586; EFJ25472.1; -; Genomic_DNA.
DR RefSeq; XP_002973098.1; XM_002973052.1.
DR RefSeq; XP_002976769.1; XM_002976723.1.
DR AlphaFoldDB; D8RQL5; -.
DR STRING; 88036.D8RQL5; -.
DR EnsemblPlants; EFJ22438; EFJ22438; SELMODRAFT_105564.
DR EnsemblPlants; EFJ25472; EFJ25472; SELMODRAFT_173175.
DR Gramene; EFJ22438; EFJ22438; SELMODRAFT_105564.
DR Gramene; EFJ25472; EFJ25472; SELMODRAFT_173175.
DR KEGG; smo:SELMODRAFT_105564; -.
DR KEGG; smo:SELMODRAFT_173175; -.
DR eggNOG; KOG1190; Eukaryota.
DR HOGENOM; CLU_015171_6_2_1; -.
DR InParanoid; D8RQL5; -.
DR OMA; AANNNAC; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0043484; P:regulation of RNA splicing; IBA:GO_Central.
DR CDD; cd12687; RRM1_PTBPH3; 1.
DR CDD; cd12692; RRM2_PTBPH3; 1.
DR CDD; cd12698; RRM3_PTBPH3; 1.
DR CDD; cd12426; RRM4_PTBPH3; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR034795; PTBPH3_RRM1.
DR InterPro; IPR034796; PTBPH3_RRM2.
DR InterPro; IPR034797; PTBPH3_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 6..80
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 249..323
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 359..433
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 83..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 195..222
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..219
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 436 AA; 48593 MW; 8050C7CE376E3944 CRC64;
MTEPSKVLHV RNVGQEITES DLLGLVQPFG SVSKMVLLRT KNQALLQMQD VNAAISAMQY
YTSVQPSVRG RNVYIQFSSH QELTTSDQAT QPRRPAGDQD QQPNRILLVT IHHPLYPITV
DVLHQVFNPH GHVEKIVTFQ KSAGLQALIQ YNNQQSAVYA KSLLQGRNIY DGCCTLDIQF
SNLQELQVNF NNERTRDYTN SSLPNEPGRS QNPPGGNNMM VPMTPSAAAA AAASGGTLPP
GVTGTNERCT LLVSNLAPEK VDADKLFNLF SNYGNIIRIK MLHNKPDHAL IQMGDGYQAE
LAVYYLRGTM LFEKRMEVNF SKHSQINPSQ DTHDYSSSNL NRFNRNALKN YKYCCSPTKM
IHVSSLPTDI TEVDLMNHLS PHGNILNVKI FEANGKKQAL VHFDNEEQAT EALVCKHATV
VKKSTVRLAF SKLSNI
//
