ID D8RU71_SELML Unreviewed; 802 AA.
AC D8RU71;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=SELMODRAFT_101722 {ECO:0000313|EMBL:EFJ24356.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ24356.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; GL377590; EFJ24356.1; -; Genomic_DNA.
DR RefSeq; XP_002974836.1; XM_002974790.1.
DR AlphaFoldDB; D8RU71; -.
DR EnsemblPlants; EFJ24356; EFJ24356; SELMODRAFT_101722.
DR GeneID; 9636763; -.
DR Gramene; EFJ24356; EFJ24356; SELMODRAFT_101722.
DR KEGG; smo:SELMODRAFT_101722; -.
DR eggNOG; KOG0167; Eukaryota.
DR HOGENOM; CLU_004912_0_0_1; -.
DR InParanoid; D8RU71; -.
DR OMA; FMCRRAS; -.
DR OrthoDB; 468988at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16664; RING-Ubox_PUB; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR045210; RING-Ubox_PUB.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45958; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR PANTHER; PTHR45958:SF14; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 3.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 25..104
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
SQ SEQUENCE 802 AA; 88771 MW; 9E0D0B97A3BC3C78 CRC64;
MVEELLSTLA CENSALLQTD NEAIPSFDAF ECPLTKQVMK DPVVLESEHT YERNAIEEWF
RTCREQDREP TCPSSGRVLS TTELHSNLVL RKTIEEWYQR NVAFRVQSVV DRLTAVELMQ
DVDGALDEIL RLFNENPMNK WKIKSANLIP KIAKIWSLEG AAYFRSKALE VLDRMAVDDA
DNQHIIVKEG FLRFSVRSLG SKEDEEKANA ARLLYHLSTS SLEVCEVLGT GKGAVIHLAG
LLASKDHDLS QLAEKTLRNL EQVESNVLEM AEAGRIQPLL ARLCEGPQET RIRMASYLAK
RHLVKSQVKL VAQSATRSLI AMLPGTLEAK EASLGVFLML SSLADNKSLL IEAGILPPLL
DIMFSIHSSV NNRALKLKEW AAEVVSKLVS SRGSWENASI DAEGTTLYSE FVVHNLLGLM
AHARPDWKHT LLQILTGMAS SPDAGEEACE HIRSGHGVRI CAVFLSETSV DSHRLHALRL
LAVIAPRLGP DIVREFHGTE MAARLQALLR STNTEERAAA AFVLGAIPMT EKEVSQHLEP
ELLEWTLTTL ASLKDSKRGR SHTRLLSETI EGLLGILLHF LRFNALSPPA TLRQHDVMTL
LVNELDRQGE FVIKHRAAMG IKCLSNMAAS LCRKPELPPT TCFCFRSRPG KLSCSIHPGV
CDPADSVCMV EARAIVPVLE LLEEEDQGVQ LAAMEALSTL LADSSNLRGA VEELCRVEGL
QKILELFYGL QKGELQDRTA WVVERIVRVD DLAKSLSVDT KLFKALVEAF KFGSATTKAL
AQDALTNLKQ LSGVSAGVRR KK
//
