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Database: UniProt
Entry: D8S131_SELML
LinkDB: D8S131_SELML
Original site: D8S131_SELML 
ID   D8S131_SELML            Unreviewed;       901 AA.
AC   D8S131;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 65.
DE   RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=SELMODRAFT_176012 {ECO:0000313|EMBL:EFJ21770.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ21770.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; GL377598; EFJ21770.1; -; Genomic_DNA.
DR   RefSeq; XP_002977161.1; XM_002977115.1.
DR   AlphaFoldDB; D8S131; -.
DR   STRING; 88036.D8S131; -.
DR   EnsemblPlants; EFJ21770; EFJ21770; SELMODRAFT_176012.
DR   GeneID; 9638801; -.
DR   Gramene; EFJ21770; EFJ21770; SELMODRAFT_176012.
DR   KEGG; smo:SELMODRAFT_176012; -.
DR   HOGENOM; CLU_005070_4_2_1; -.
DR   InParanoid; D8S131; -.
DR   OMA; NIRRIHI; -.
DR   OrthoDB; 275944at2759; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          68..210
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   DOMAIN          485..520
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
SQ   SEQUENCE   901 AA;  99283 MW;  1F3A2610A6A46475 CRC64;
     MIRGSNHGQV RAAFITRTRT LQTYVGMRKP SPLDSLATRT CKDWNSVVSS VSTSGGRGAS
     RGVVVAMFER FTEKAIKVIM LAQEEARRLG HNFVGTEQIL LGLIGEGTGI AAKVLKSMGV
     NLKEARVEVE KIIGRGSGFV AVEIPFTPRA KRVLELSLEE ARQLGHNYIG SEHLLLGLLR
     EGEGVAARVL ENLGADPGNI RTQVIRMVGE STEAVGASVG GGSSSNKMPT LEEYGTNLTK
     LAEEGKLDPV VGRQQQIERV TQILGRRTKN NPCLIGEPGV GKTAIAEGLA QRIATGDVPE
     TIEGKKVVTL DMGLLVAGTK YRGEFEERLK KLMEEIKQSD DIILVIDEVH TLIGAGAAEG
     AIDAANILKP ALARGELQCI GATTIDEYRK HIEKDPALER RFQPVNVPEP TVDETIQILK
     GLRERYEIHH KLRYTDEALV AAAQLSYQYI SDRFLPDKAI DLIDEAGSRV RLRHAQLPEE
     ARDLDKELRQ ITKEKNEAVR GQDFEKAGEL RDREMELKAQ ISAITEKGKE KSKAETEAGE
     TGPLVTEADI QQIVSAWTGI PVEKVSTDES DRLMKMEETL HQRVIGQDEA VKAISRAIRR
     ARVGLKNPNR PIASFIFSGP TGVGKSELAK ALAAYYFGSE EAMVRLDMSE FMERHTVSKL
     IGSPPGYVGY TEGGQLTEAV RRRPYTVVLF DEIEKAHPDV FNMMLQILED GRLTDSKGRT
     VDFKNTLLIM TSNVGSSVIE KGGGGIGFQL DYGEKDSSYN RIKTLVNEEL KQYFRPEFLN
     RLDEIIVFRQ LTKTEVKEIA DIMLKEVFER LKKKEIDLQV TERFRDRVVD EGYSPSYGAR
     PLRRAIMRLL EDSMAERMLS GEVKEGDSAI IDVDSEGNVT VLNGTAGTAS SSSIEAPAGV
     A
//
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