ID D8S303_SELML Unreviewed; 789 AA.
AC D8S303;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ21181.1};
GN ORFNames=SELMODRAFT_268097 {ECO:0000313|EMBL:EFJ21181.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ21181.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377600; EFJ21181.1; -; Genomic_DNA.
DR RefSeq; XP_002977843.1; XM_002977797.1.
DR AlphaFoldDB; D8S303; -.
DR STRING; 88036.D8S303; -.
DR EnsemblPlants; EFJ21181; EFJ21181; SELMODRAFT_268097.
DR GeneID; 9656445; -.
DR Gramene; EFJ21181; EFJ21181; SELMODRAFT_268097.
DR KEGG; smo:SELMODRAFT_268097; -.
DR eggNOG; KOG0730; Eukaryota.
DR HOGENOM; CLU_000688_12_3_1; -.
DR InParanoid; D8S303; -.
DR OrthoDB; 297106at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0034098; C:VCP-NPL4-UFD1 AAA ATPase complex; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0031593; F:polyubiquitin modification-dependent protein binding; IBA:GO_Central.
DR GO; GO:0097352; P:autophagosome maturation; IBA:GO_Central.
DR GO; GO:0071712; P:ER-associated misfolded protein catabolic process; IBA:GO_Central.
DR GO; GO:0051228; P:mitotic spindle disassembly; IBA:GO_Central.
DR GO; GO:0030970; P:retrograde protein transport, ER to cytosol; IBA:GO_Central.
DR GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IBA:GO_Central.
DR CDD; cd19519; RecA-like_CDC48_r1-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.10.330.10; -; 1.
DR Gene3D; 6.10.20.150; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR005938; AAA_ATPase_CDC48.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR004201; Cdc48_dom2.
DR InterPro; IPR029067; CDC48_domain_2-like_sf.
DR InterPro; IPR003338; CDC4_N-term_subdom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR01243; CDC48; 1.
DR PANTHER; PTHR23077; AAA-FAMILY ATPASE; 1.
DR PANTHER; PTHR23077:SF171; ATPASE FAMILY PROTEIN 2 HOMOLOG; 1.
DR Pfam; PF00004; AAA; 2.
DR Pfam; PF17862; AAA_lid_3; 2.
DR Pfam; PF02933; CDC48_2; 1.
DR Pfam; PF02359; CDC48_N; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01072; CDC48_2; 1.
DR SMART; SM01073; CDC48_N; 1.
DR SUPFAM; SSF50692; ADC-like; 1.
DR SUPFAM; SSF54585; Cdc48 domain 2-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00674; AAA; 2.
PE 4: Predicted;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 19..103
FT /note="CDC48 N-terminal subdomain"
FT /evidence="ECO:0000259|SMART:SM01073"
FT DOMAIN 120..187
FT /note="CDC48"
FT /evidence="ECO:0000259|SMART:SM01072"
FT DOMAIN 233..369
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 506..645
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
SQ SEQUENCE 789 AA; 87620 MW; 96A5267F39846BAA CRC64;
MASSSTGGEQ PAKKVALHRL VVDDAILHDD NSIVTLHPDR IQALNLTPGD TVLVKGKRRR
DTVLILLADE HCEEFKVRIN KVVRVNLRVK LGEVVSIHQI QEVKYAKKVH VLPLDDTIEG
LTGNLFDSFL KDYFTECFRP LRKGDLFLVR GAMRAVEFKV VEIDPPGEYC YVSADTEIFC
EGEPVRREDE ENKLNEIGYE DIGGVRKQLA LIREAVELPL RHPTLFRTIG VKPPRGILLF
GPPGTGKTMI ARAVANETGA FFTVINGPEI MSKLNGESES NLRKAFAEAE RNAPSIIFID
EVDSIAPKRE QAHGEVERRI VSQLLTLMDG LKTRSNVVVM AATNRPNSID PALRRFGRFD
REIDIGVPDG VGRLEILRVH TKNMKLSDDV DLESVSQNLH GFVGADLASL CSEAAMNCIR
KKMDIIDLEA ETIDAEILNL MAVDKDDFQL ASGVSNPSAL RETLVEVPDV SWEDIGGLES
VKRELEETIQ YPIEFPHMFE KFGMSPSKGV LFYGPPGCGK TLLAKAVATM IHCNFITIKG
PELLSKYLGE SEGNVREVFD KARASAPCVL FFDELDSIAI QRGISANDAG GAVDRVLNQL
LIEMDGLTAK KTVFIIGATN RPDILDSALL RPGRLDQLIY IPLPDEPSRL KIFQACLRKT
PLSMDVDLAA LARHTPGFSG ADITEICQRA CKFAIREDIE KDMKKAAENG GEDMMDEDNA
VAYVELRHFE ESMRFARRSV SDADVRKYKA FSQSLHQSRG FGEFKFPGAK HQMLDQNDTA
QMPDGDLYA
//
