ID D8SAJ4_SELML Unreviewed; 801 AA.
AC D8SAJ4;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_112174 {ECO:0000313|EMBL:EFJ18608.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ18608.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377609; EFJ18608.1; -; Genomic_DNA.
DR RefSeq; XP_002980348.1; XM_002980302.1.
DR AlphaFoldDB; D8SAJ4; -.
DR EnsemblPlants; EFJ18608; EFJ18608; SELMODRAFT_112174.
DR GeneID; 9647382; -.
DR Gramene; EFJ18608; EFJ18608; SELMODRAFT_112174.
DR KEGG; smo:SELMODRAFT_112174; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; D8SAJ4; -.
DR OMA; HKLFQRM; -.
DR OrthoDB; 459799at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 75..109
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 183..217
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 285..319
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 391..425
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 495..529
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 709..801
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 801 AA; 87539 MW; 3E173A05BEB6EDBE CRC64;
MEVRPNCHAL IALVNACSCL GNLAAGRRIH SQISDRDFEE NSVLGNALIS MYSKCGSLID
AKQAFDRLPR ASKRDVVTWN AMISAFLRNG SAREALQLFR DMDHDGAPPP NSVTFVSVLD
SCVEAGLLSL EDVRAIHGRI VGAGIEREAF VRTALVDSYG KLGSLDDAWE VFLRKSDEEP
STSLVTCSAM ISACWQNGWP QESLRLFYAM NLEGTKPSGV TLVSVLNACS MLPVGSATAF
VLEQAMEVVS ATRDNVLGTT LLTTYARSND LSRARATFDA IQSPDVVSWN AMAAAYLQHH
RPREALVLFE RMLLEGVRPS VATFITALTA CAAYPPQTAS AIGKRIQSLL EEAGLEGDTA
VANATLNMYA KCGSLADARA VFERISPTRR DCITWNSMLA AYGHHGLGKE AFELFQAMEA
EKLVKPNKVT FVAVLDASTS RTSIAQGREI HARVVSNGFE SDTVIQNALL NMYAKCGSLD
DAQAIFDKSS SNQEDVIAWT SLVAGYAQYG QAERALKLFW TMQQQGVRPN HITFISALTA
CNHGGKLEQG CELLSGMTPD HGIVPASKHF SCIVDLLGRC GRLDEAEKLL ERTSQADVIT
WMALLDACKN SKELERGERC AERIMQLDPE VASSYIVLAS MYAAAGRWNE AATIRKTMLD
KGIRADPGCS AVEVNQELHS FSAGDKSHPK SEEIYLELER LHWSIKAAGY VADTGLVLHD
VSQEHKERLL MRHSEKLAIA FGLMSTPSGS PLRVIKNLRV CSDCHTATKL ISKVTGRDIL
MRDSSRYHHF TSGTCSCGDY W
//
