ID D8T300_SELML Unreviewed; 818 AA.
AC D8T300;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_130658 {ECO:0000313|EMBL:EFJ08941.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ08941.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377667; EFJ08941.1; -; Genomic_DNA.
DR RefSeq; XP_002989928.1; XM_002989882.1.
DR AlphaFoldDB; D8T300; -.
DR EnsemblPlants; EFJ08941; EFJ08941; SELMODRAFT_130658.
DR Gramene; EFJ08941; EFJ08941; SELMODRAFT_130658.
DR KEGG; smo:SELMODRAFT_130658; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_0_1; -.
DR InParanoid; D8T300; -.
DR OMA; HIMNACA; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 9.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 74..108
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 172..202
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 241..271
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 272..306
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 342..376
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 407..442
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 478..508
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 509..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 646..680
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 724..818
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 818 AA; 90607 MW; D7A43B1C74730E5E CRC64;
MDRQPDNVTF LTVLCSCSSC GDVAEGRALH ERIRCSRFER DTMVGNALIS MYGKCDSLVD
ARSVFESMDW RQRNVVSWNA MIAAYAQNGH STEALVLYWR MNLQGLGTDH VTFVSVLGAC
SSLAQGREIH NRVFYSGLDS FQSLANALVT MYARFGSVGD AKRMFQSLQT RDETSWNAVI
LAHSQSGDWS GALRIFKEMK CDMKPNSTTY INVISGFSTP EVLPEGRKIH AEIVANGFDS
DLVVATALIN MYGKCGSSHE AREVFDKMKK RDMVSWNVMI GCYVQNGDFH EALELYQKLD
MEGFKRTKAT FVSILGACSS VKALAQGRLV HSHILERGLD SEVAVATALV NMYAKCGSLE
EARKVFNAMK NRDAVAWSTL IGAYASNGYG KDARKARKVF DRLGSRDTIC WNAMITTYVQ
NGCAVAAMKI FREMTGAAGL KPDAVTFIAV LEACASLGRL SEVKALHAQI SESELESNVV
VTNTLINMYA RCGSLEEAER LFAAAKEKTV VSWTAMVAAF SQYGRYAEAL DLFQEMDLEG
VKPDDVTYTS ILFVCTHGGS LEQGWRYFTD MAELHGLAPT ADHFAAMVDL LGRSGRLFDA
KELLESMPFE PDPVAWMTFL TACRIHGKLE LGEAAAERVY ELDPSSTAPY IAMSNIYAAH
GMWEKVASVR KKMEERGLKK LPGLSFIEVD GKLHEFSSGG KYHPRTDEIC EELTRLHGLM
RAAGYVPDTK AVLHDVSEGE KETMLLYHSE KMAIAFGLVS SRGSGEPIRV VKNLRVCSDC
HTATKFIARI AGRDIILRDC NRFHRFSSDG KCSCGDYW
//
