ID D8T6Q2_SELML Unreviewed; 369 AA.
AC D8T6Q2;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 49.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=SELMODRAFT_429603 {ECO:0000313|EMBL:EFJ07680.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ07680.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377682; EFJ07680.1; -; Genomic_DNA.
DR RefSeq; XP_002991252.1; XM_002991206.1.
DR AlphaFoldDB; D8T6Q2; -.
DR EnsemblPlants; EFJ07680; EFJ07680; SELMODRAFT_429603.
DR Gramene; EFJ07680; EFJ07680; SELMODRAFT_429603.
DR KEGG; smo:SELMODRAFT_429603; -.
DR eggNOG; KOG2850; Eukaryota.
DR HOGENOM; CLU_054150_0_0_1; -.
DR InParanoid; D8T6Q2; -.
DR OMA; LKRAWAP; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR InterPro; IPR045030; LYSM1-4.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR PANTHER; PTHR20932:SF36; LD22649P; 1.
DR PANTHER; PTHR20932; LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01476; LysM; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF54106; LysM domain; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 49..93
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT REGION 92..118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 170..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 316..340
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 100..117
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 369 AA; 40030 MW; CBD38A9EB31FDE0D CRC64;
MVCSNFGFWG DCVLRFGSGR GPGRGAGRFS EDLMDLDGDA STSGGEGYIV HYVSKLDTLA
GIAIKYGVEV ADVKRLNGLS TDLQMFARKS LRIPSSAKHP PSEQFASHSS ANSEQPRLGR
HSFCDIVLPN KSEEPTKVSS AMSLMRGYYG LSTSKLEGEG TEMEVYRTDN GYQSEDEPFT
PRDQVSNRPR AHAPTNLATE PKLASFNSMV SMARDFVAHE VEKARERVAV RRRPKGEALA
AEDHSAKQQL LGDRTNYAVR SSVPRPKASR LGLEVEVDCP AGRAVVFNSG GEAGNGKGLR
SGKVVEELIF KLKKSPSAPN FQDEKPPPSS MLKNGSKGDL ASWSQAQIQS SVTIPLLDSF
TRRSKAALD
//
