ID D8TC35_SELML Unreviewed; 214 AA.
AC D8TC35;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=SELMODRAFT_236680 {ECO:0000313|EMBL:EFJ05775.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ05775.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377714; EFJ05775.1; -; Genomic_DNA.
DR RefSeq; XP_002993135.1; XM_002993089.1.
DR AlphaFoldDB; D8TC35; -.
DR EnsemblPlants; EFJ05775; EFJ05775; SELMODRAFT_236680.
DR GeneID; 9652555; -.
DR Gramene; EFJ05775; EFJ05775; SELMODRAFT_236680.
DR KEGG; smo:SELMODRAFT_236680; -.
DR eggNOG; KOG2850; Eukaryota.
DR HOGENOM; CLU_071942_0_0_1; -.
DR InParanoid; D8TC35; -.
DR OMA; CCCNQND; -.
DR OrthoDB; 1206083at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR045030; LYSM1-4.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR PANTHER; PTHR20932; LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR20932:SF8; LYSM DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF01476; LysM; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF54106; LysM domain; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 72..116
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 214 AA; 23503 MW; 71705B85CE9F46EB CRC64;
MENGDAWRLI LGKLPVPGLA RAACVCRSWR EFAADPAVIA AAFAAPWELK QLVGVPSTPS
LWKASGLGCF AISHPVTKSD SVAALAIKYK VQVSEIRRLN NMLSDHGIRA RDRLLIPVTS
PCALRGKVCF IEMDLHSRRE MAVIYPDGLG PLHDPKVAAT SLKSTVFRSM KTSMRLDSET
AQYYLALAGG NFKQALAELK GDLDWEERNL SPLW
//
