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Database: UniProt
Entry: D9RXY0_THEOJ
LinkDB: D9RXY0_THEOJ
Original site: D9RXY0_THEOJ 
ID   D9RXY0_THEOJ            Unreviewed;       515 AA.
AC   D9RXY0;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 83.
DE   SubName: Full=Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family {ECO:0000313|EMBL:ADL08204.1};
GN   OrderedLocusNames=Toce_1452 {ECO:0000313|EMBL:ADL08204.1};
OS   Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /
OS   JW/IW-1228P).
OC   Bacteria; Bacillota; Clostridia; Thermosediminibacterales;
OC   Thermosediminibacteraceae; Thermosediminibacter.
OX   NCBI_TaxID=555079 {ECO:0000313|EMBL:ADL08204.1, ECO:0000313|Proteomes:UP000000272};
RN   [1] {ECO:0000313|EMBL:ADL08204.1, ECO:0000313|Proteomes:UP000000272}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-1034 / DSM 16646 / JW/IW-1228P
RC   {ECO:0000313|Proteomes:UP000000272};
RX   PubMed=21304740;
RA   Pitluck S., Yasawong M., Munk C., Nolan M., Lapidus A., Lucas S.,
RA   Glavina Del Rio T., Tice H., Cheng J.F., Bruce D., Detter C., Tapia R.,
RA   Han C., Goodwin L., Liolios K., Ivanova N., Mavromatis K., Mikhailova N.,
RA   Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Rohde M., Spring S., Sikorski J., Goker M., Woyke T.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Thermosediminibacter oceani type strain
RT   (JW/IW-1228P).";
RL   Stand. Genomic Sci. 3:108-116(2010).
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DR   EMBL; CP002131; ADL08204.1; -; Genomic_DNA.
DR   AlphaFoldDB; D9RXY0; -.
DR   STRING; 555079.Toce_1452; -.
DR   KEGG; toc:Toce_1452; -.
DR   eggNOG; COG3829; Bacteria.
DR   HOGENOM; CLU_000445_8_1_9; -.
DR   OMA; RACHAIS; -.
DR   Proteomes; UP000000272; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.30.70.260; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR045865; ACT-like_dom_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR030828; HTH_TypR.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   NCBIfam; TIGR04381; HTH_TypR; 1.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF18024; HTH_50; 1.
DR   Pfam; PF00989; PAS; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF55021; ACT-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000272};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          207..437
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   515 AA;  58409 MW;  D3AC381FD8ADD5BF CRC64;
     MKKFRYRIRF NDRVGMVRDI SEIVAKGGAN ISSLAVKQGE IYLQIESMPE DKLHSILRDI
     SSIPDVYELT PVEWMPHELA EQHLRTVINS VHEGILSINR NFIISTCNVR AMQILKFDQL
     PIGKALYDVM DLPKDILERI EKGKPVEQKE VIIRTSKGPS RFMINSKPIF DDRGETAGAV
     ITLMKMSEIR RLAHSLTRPV MVTFDDIIYK SKKIKEIVDM AKTVAAGDST VLLRGESGTG
     KELFARAIHM ESPRRDCPFV AVNCAAIPDT LLESELFGYA DGTFTGARRG GRPGLFEFAH
     HGTIFLDEIA ELPPHIQAKL LRVLQEGNVR RLGEMEEIRV DVRIIAATNR PLEEMVVRGD
     FREDLFYRLN VIPIYLPPLR DHKEDIPVLV DYFIKKFNQK FSKSVQGISP DALELLLNYH
     WPGNIRELEN VMERAMNLCK DHIIKVKDII INTPSILVSP GEKYFHLKEI VQETEKEALL
     RALAQGGSAR KAAKILGVSH TTVIKKLKKY GLTPD
//
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