ID D9SH81_GALCS Unreviewed; 1302 AA.
AC D9SH81;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADL55878.1};
GN OrderedLocusNames=Galf_1869 {ECO:0000313|EMBL:ADL55878.1};
OS Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea
OS capsiferriformans (strain ES-2)).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Gallionellaceae; Gallionella.
OX NCBI_TaxID=395494 {ECO:0000313|EMBL:ADL55878.1, ECO:0000313|Proteomes:UP000001235};
RN [1] {ECO:0000313|EMBL:ADL55878.1, ECO:0000313|Proteomes:UP000001235}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ES-2 {ECO:0000313|EMBL:ADL55878.1,
RC ECO:0000313|Proteomes:UP000001235};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Chertkov O., Davenport K.W., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N.,
RA Mikhailova N., Shelobolina E.S., Picardal F., Roden E., Emerson D.,
RA Woyke T.;
RT "Complete sequence of Gallionella capsiferriformans ES-2.";
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002159; ADL55878.1; -; Genomic_DNA.
DR RefSeq; WP_013293812.1; NC_014394.1.
DR STRING; 395494.Galf_1869; -.
DR KEGG; gca:Galf_1869; -.
DR eggNOG; COG0715; Bacteria.
DR eggNOG; COG0834; Bacteria.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG3290; Bacteria.
DR HOGENOM; CLU_000445_86_2_4; -.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000001235; Chromosome.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 4.
DR CDD; cd01007; PBP2_BvgS_HisK_like; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 4.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 4.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR InterPro; IPR015168; SsuA/THI5.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 4.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF2; GGDEF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF09084; NMT1; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 2.
DR Pfam; PF00497; SBP_bac_3; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 4.
DR SMART; SM00091; PAS; 4.
DR SMART; SM00062; PBPb; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 4.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001235};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..31
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 32..1302
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5005672447"
FT DOMAIN 650..692
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 735..812
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 865..918
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 945..996
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 997..1068
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 1070..1120
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1152..1299
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT COILED 606..633
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1302 AA; 146431 MW; DDD7694C77860C6F CRC64;
MYPNSVKASR FTLTNWLSIV VLMLITALAT AQPQNIQTPP PPEKVRLQLK WFNQFQFAGY
YAAIEQGYYA QNNLDVELLE RTLSQNVVQQ VVTGEAEYGI GDSGLLSHYA QGAPIVALAA
IFQHNPLVFF SRQDSGISSP FEIKGRTIMS DISSADEAPL RAMLTGANIK PEDYTLLPQK
NDYGLLGKKQ IDVISGYLTD QPFYFKEKGI KINIINPQNY GIDFYGDMLF TSTRELRDHP
ERVKRFRQAS LLGWQYAMAH PEEMIQLIRN KYHSKLSVEH LRFEAREAKK LILPGVIPIG
QIQPERIKAI AKSFSDSGHN KPLSDTGVAD FIYTGKASQL NLTDAEKAWL AAHPVLRVGV
DSDFAPYEWI DEQGHYVGMA ADYMKLLEKK LGVRFEIIHG KSWDEILNMA KRGELELLAC
ANKTPERSQY LTFSEPYKSA FAVIIDSGQG NFIGNLQNLA GRRVAVENGY FMQELMAKHY
PKIQLIPTTN TTEALKLVLN GAADAYVGDA GTANYMIKKN GFLSLRFSGQ TEYHSIHSVA
ATKSHPELAT IIFKAISSIP KEESDAIFNR WLGLKIEQGF KAETLIQYGA GAGLLFLLFG
YWVYRLRREI DQRKILEKSV EENREKYRAL SEAAFEAIFI SEHGLGLEQN RQASALFGYS
DQEIIGKPGI EFIAEKDRAL VKHNMSSGYE LPYEALCLHK NGATFPAIIC GKMMHYRGRD
VRVTSITDVT EQKNREAQIR TMLSEQKAML ENDLIGIVRV KDRTIIWANP AYEKIMGYQP
GEMTGMPTRQ NFANDKSYLE LGKVAYPLLE SGKVFRAQLE HVCKNGQRIW VDMSGSMLNS
TRGESLWAFL DITDRKRTET ILQATNLKMN SLLSSMAEGA YGIDTNGHCT FVNPSFLRIL
GYEHAEEVIG AHIHELIHHS HADGTIYPAA ECKMYMAYQK NEKAHSVDEV FWRRDGSAIP
VEYWAQPIVI DGVITGVIAT FIDISERKLA EAQLVESESR LRAIIENEPE CIKIVDAQGK
LTQMNPAGLK MIEADSLAQI AGHNILELIA PEYRQEFSRM HQRVLAGETV QMEFEILGLK
GGRRVLETHA VPMKEYGQTV QLAVTRDITE RKKLEADIHQ LAFYDTLTHL PNRRLMNERL
AHAIMASRRS ERYCALMFLD LDNFKPLNDT HGHVVGDALL VEVARRLKTC VREIDTVSRF
GGDEFTVMLS ELDVTLSDSV MQAQTIAEKI RGSLAEPYLL TIRHEGVADT IVKHHCSVSI
GIAVFIGHDA EGDEILKWAD AAMYQAKAAG RNQICFYQGA QA
//
