ID E0SJT6_DICD3 Unreviewed; 781 AA.
AC E0SJT6;
DT 02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE SubName: Full=Predicted transcriptional accessory protein {ECO:0000313|EMBL:ADN00375.1};
DE EC=3.1.-.- {ECO:0000313|EMBL:ADN00375.1};
GN Name=yhgF {ECO:0000313|EMBL:ADN00375.1};
GN OrderedLocusNames=Dda3937_04417 {ECO:0000313|EMBL:ADN00375.1};
OS Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Dickeya.
OX NCBI_TaxID=198628 {ECO:0000313|EMBL:ADN00375.1, ECO:0000313|Proteomes:UP000006859};
RN [1] {ECO:0000313|EMBL:ADN00375.1, ECO:0000313|Proteomes:UP000006859}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3937 {ECO:0000313|EMBL:ADN00375.1,
RC ECO:0000313|Proteomes:UP000006859};
RX PubMed=21217001; DOI=10.1128/JB.01513-10;
RA Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N.,
RA Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D.,
RA Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K.,
RA Rauscher L., Rodriguez-Palenzuela P., Toussaint A., Holeva M.C., He S.Y.,
RA Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S.,
RA Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S.,
RA Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M.,
RA Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R.,
RA Blattner F.R., Keen N.T., Perna N.T.;
RT "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.";
RL J. Bacteriol. 193:2076-2077(2011).
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DR EMBL; CP002038; ADN00375.1; -; Genomic_DNA.
DR RefSeq; WP_013319774.1; NC_014500.1.
DR AlphaFoldDB; E0SJT6; -.
DR STRING; 198628.Dda3937_04417; -.
DR GeneID; 9735661; -.
DR KEGG; ddd:Dda3937_04417; -.
DR PATRIC; fig|198628.6.peg.4117; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_6; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000006859; Chromosome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:ADN00375.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000006859}.
FT DOMAIN 650..719
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 720..781
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 738..769
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 781 AA; 85702 MW; 835CE318E71ACC4E CRC64;
MTNALSQIIA SELQARNEQV SAAIQLLDEG NTVPFIARYR KEVTGGLDDT QLRQLETRLS
YLRELEERRQ TILKSIEEQG KLTDALATSI NTTLSKTELE DLYLPYKPKR RTRGQIAIEA
GLEPLADSLW NDPSQTPELV AEAYINADNG VADVKAALDG ARYILMERFA EDAALLAKVR
DYLWKNAHLV SRVVEGKEED GAKFRDYFDH HEPLSQVPSH RALAMFRGRN EGVLQLSLNA
DPQFDEPPKE SHCEHIIIEH LGLRLGNAPA DGWRRAVVNW TWRIKVLLHL ETELMGSVRE
KAEDEAINVF ARNLHDLLMA APAGMRATMG LDPGLRTGVK VAVVDATGKL VATDTIYPHT
GQTAKAATVV AALCIKHQVE LVAIGNGTAS RETERFFLDT QKQFPDVKAQ KVIVSEAGAS
VYSASELAAL EFPDLDVSLR GAVSIARRLQ DPLSELVKID PKSIGVGQYQ HDVSQTQLAK
KLDAVVEDCV NGVGVDLNTA SVPLLTRVAG LTRLMAQNIV SWRDENGRFN NRDQLLKVSR
LGPKAFEQCA GFLRINHGDN PLDASTVHPE AYPVVERILA ATEQKLQDLM GNASALRSLK
PASFTDDRFG VPTVTDIIKE LEKPGRDPRP EFKTASFADG VETLNDLLPG MILEGAVTNV
TNFGAFVDIG VHQDGLVHIS SLSDRFVEDP HQVVKAGDIV KVKVLEVDLQ RKRIALTMRL
DEQPGEGNSR RGSGGRERDN GNNNASRPSQ AGNKARPRQS NTPASGNSAM SDALAAAFKK
R
//
