GenomeNet

Database: UniProt
Entry: E1R1M0_SEDSS
LinkDB: E1R1M0_SEDSS
Original site: E1R1M0_SEDSS 
ID   E1R1M0_SEDSS            Unreviewed;       460 AA.
AC   E1R1M0;
DT   30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2010, sequence version 1.
DT   27-MAR-2024, entry version 53.
DE   SubName: Full=PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ADK81161.1};
GN   OrderedLocusNames=Spirs_2039 {ECO:0000313|EMBL:ADK81161.1};
OS   Sediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)
OS   (Spirochaeta smaragdinae).
OC   Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae;
OC   Sediminispirochaeta.
OX   NCBI_TaxID=573413 {ECO:0000313|EMBL:ADK81161.1, ECO:0000313|Proteomes:UP000002318};
RN   [1] {ECO:0000313|EMBL:ADK81161.1, ECO:0000313|Proteomes:UP000002318}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 11293 / JCM 15392 / SEBR 4228
RC   {ECO:0000313|Proteomes:UP000002318};
RX   PubMed=21304743; DOI=10.4056/sigs.1143106;
RA   Mavromatis K., Yasawong M., Chertkov O., Lapidus A., Lucas S., Nolan M.,
RA   Del Rio T.G., Tice H., Cheng J.F., Pitluck S., Liolios K., Ivanova N.,
RA   Tapia R., Han C., Bruce D., Goodwin L., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C., Rohde M.,
RA   Brambilla E., Spring S., Goker M., Sikorski J., Woyke T., Bristow J.,
RA   Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P., Kyrpides N.C.;
RT   "Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR
RT   4228).";
RL   Stand. Genomic Sci. 3:136-144(2010).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002116; ADK81161.1; -; Genomic_DNA.
DR   RefSeq; WP_013254625.1; NC_014364.1.
DR   AlphaFoldDB; E1R1M0; -.
DR   STRING; 573413.Spirs_2039; -.
DR   KEGG; ssm:Spirs_2039; -.
DR   eggNOG; COG1413; Bacteria.
DR   HOGENOM; CLU_594354_0_0_12; -.
DR   OrthoDB; 366879at2; -.
DR   Proteomes; UP000002318; Chromosome.
DR   GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR004155; PBS_lyase_HEAT.
DR   PANTHER; PTHR12697:SF5; DEOXYHYPUSINE HYDROXYLASE; 1.
DR   PANTHER; PTHR12697; PBS LYASE HEAT-LIKE PROTEIN; 1.
DR   Pfam; PF13646; HEAT_2; 2.
DR   SMART; SM00567; EZ_HEAT; 5.
DR   SUPFAM; SSF48371; ARM repeat; 1.
PE   4: Predicted;
KW   Lyase {ECO:0000313|EMBL:ADK81161.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002318}.
SQ   SEQUENCE   460 AA;  50912 MW;  35877D3793FE4069 CRC64;
     MISFHKKQLT IMAFFWFFVL VTSSLSLLYA EEDDMKSVYE ERKETIAYGI DSEVSALIDA
     IIKEKDDRFE NELMDLYRSS LNETVKAKII SYFDALDLDS GRDIFFSTLS EEWDQDTSFD
     LVSAAITYLK KRQTKEITTF FAETLLPDRN DRISTAAVSA IGDSGDSSFS TLLEEELDSS
     DLSDNKRAEL ISAIGKLGDA HAVSTLVDLL LDEGEDKSIR WRAASALGEI GGDSSLEALM
     EVFDSSDPIL RSRATAALTK FDGQQAEQAL IQALRDSFWR VRVAAATALG ERKSEDAVDI
     LIYKAKSDPD IKNVRSAAVS ALGEIGSGKA SDLLVELYLD SKVPMEIRSQ SLIALLKSDE
     GKALTAVDSI VKNVTEYERQ KAIITETAKI LAMTKSDSLE DMYKKMLALT DRQEMVLSAL
     SGIRINKITS LEGEVEKLTG EENNALIRKQ ALSTLEALRN
//
DBGET integrated database retrieval system