ID E1ZJY1_CHLVA Unreviewed; 277 AA.
AC E1ZJY1;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=CHLNCDRAFT_25380 {ECO:0000313|EMBL:EFN53940.1};
OS Chlorella variabilis (Green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella.
OX NCBI_TaxID=554065 {ECO:0000313|Proteomes:UP000008141};
RN [1] {ECO:0000313|EMBL:EFN53940.1, ECO:0000313|Proteomes:UP000008141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NC64A {ECO:0000313|EMBL:EFN53940.1,
RC ECO:0000313|Proteomes:UP000008141};
RX PubMed=20852019; DOI=10.1105/tpc.110.076406;
RA Blanc G., Duncan G., Agarkova I., Borodovsky M., Gurnon J., Kuo A.,
RA Lindquist E., Lucas S., Pangilinan J., Polle J., Salamov A., Terry A.,
RA Yamada T., Dunigan D.D., Grigoriev I.V., Claverie J.M., Van Etten J.L.;
RT "The Chlorella variabilis NC64A genome reveals adaptation to
RT photosymbiosis, coevolution with viruses, and cryptic sex.";
RL Plant Cell 22:2943-2955(2010).
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DR EMBL; GL433849; EFN53940.1; -; Genomic_DNA.
DR RefSeq; XP_005846042.1; XM_005845980.1.
DR AlphaFoldDB; E1ZJY1; -.
DR STRING; 554065.E1ZJY1; -.
DR GeneID; 17353361; -.
DR KEGG; cvr:CHLNCDRAFT_25380; -.
DR eggNOG; KOG0106; Eukaryota.
DR InParanoid; E1ZJY1; -.
DR OMA; SPANGRY; -.
DR OrthoDB; 37397at2759; -.
DR Proteomes; UP000008141; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12233; RRM_Srp1p_AtRSp31_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48025; OS02G0815200 PROTEIN; 1.
DR PANTHER; PTHR48025:SF22; OS02G0815200 PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008141};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 8..80
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 99..170
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 165..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 165..205
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 277 AA; 31748 MW; 65C3969FE9FD5D66 CRC64;
MGCLTCPGAV YVGNYEYDAS ERELERTFDK YGPVERVEYK SGFCFVHYKD KRDAEDAIHA
LDGREWGRLR RRLRVEFAKN DANVREREKA RRNSADPNRT LFVAGFDPRG IRTRDIEKAF
EEFGRLVRCE IKKTFSFVEF ERIEDAKEAC EQLHGSRING REITVEYDRG GRGGGDDRYR
GRSRSRSMER RRHSPSYDRS RSPRPVRRSP SPLRRSPSPD RCLAPARAHM LGSSSFRRAC
CIALPPASCR PAGRPAVVAL LWLRPAAPTC LACRALC
//
