ID E2AFJ4_CAMFO Unreviewed; 836 AA.
AC E2AFJ4;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=La-related protein 4 {ECO:0000313|EMBL:EFN67745.1};
GN ORFNames=EAG_02692 {ECO:0000313|EMBL:EFN67745.1};
OS Camponotus floridanus (Florida carpenter ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Camponotus.
OX NCBI_TaxID=104421 {ECO:0000313|Proteomes:UP000000311};
RN [1] {ECO:0000313|EMBL:EFN67745.1, ECO:0000313|Proteomes:UP000000311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C129 {ECO:0000313|Proteomes:UP000000311};
RX PubMed=20798317; DOI=10.1126/science.1192428;
RA Bonasio R., Zhang G., Ye C., Mutti N.S., Fang X., Qin N., Donahue G.,
RA Yang P., Li Q., Li C., Zhang P., Huang Z., Berger S.L., Reinberg D.,
RA Wang J., Liebig J.;
RT "Genomic comparison of the ants Camponotus floridanus and Harpegnathos
RT saltator.";
RL Science 329:1068-1071(2010).
CC -!- SIMILARITY: Belongs to the SUI1 family.
CC {ECO:0000256|ARBA:ARBA00005422}.
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DR EMBL; GL439118; EFN67745.1; -; Genomic_DNA.
DR AlphaFoldDB; E2AFJ4; -.
DR STRING; 104421.E2AFJ4; -.
DR InParanoid; E2AFJ4; -.
DR OMA; GMMPWGP; -.
DR Proteomes; UP000000311; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR CDD; cd11566; eIF1_SUI1; 1.
DR CDD; cd08031; LARP_4_5_like; 1.
DR CDD; cd12430; RRM_LARP4_5_like; 1.
DR Gene3D; 3.30.780.10; SUI1-like domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR045180; La_dom_prot.
DR InterPro; IPR006630; La_HTH.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR001950; SUI1.
DR InterPro; IPR036877; SUI1_dom_sf.
DR InterPro; IPR005874; SUI1_euk.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR01160; SUI1_MOF2; 1.
DR PANTHER; PTHR22792:SF131; LA-RELATED PROTEIN LARP4B; 1.
DR PANTHER; PTHR22792; LUPUS LA PROTEIN-RELATED; 1.
DR Pfam; PF05383; La; 1.
DR Pfam; PF01253; SUI1; 1.
DR SMART; SM00715; LA; 1.
DR SUPFAM; SSF55159; eIF1-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50961; HTH_LA; 1.
DR PROSITE; PS50296; SUI1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000311};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00332}.
FT DOMAIN 28..98
FT /note="SUI1"
FT /evidence="ECO:0000259|PROSITE:PS50296"
FT DOMAIN 216..305
FT /note="HTH La-type RNA-binding"
FT /evidence="ECO:0000259|PROSITE:PS50961"
FT REGION 468..677
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 696..724
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 739..812
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 509..524
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 525..629
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 661..677
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 707..724
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 740..812
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 836 AA; 89411 MW; 74A24FD3E544BAE0 CRC64;
MSIQNLNTFD PFADAIKGSD DDVQDGLVHI RIQQRNGRKT LTTVQGLSSE YDLKKIVRAC
KKEFACNGTV IEHPEYGEVL QLQGDQRENI CQWLTKSGLA KPDQLKVHGY VYMNGDIGKL
PPGAVYPATP EPLGLQVAGA IGGGVPNIDY GVMNGAPSGS ELILDTGVGS LEPSPQHAIG
MHGSAIGYSP VDVAALADAS AAPPPSAPMA DLNVPGIPLE QLKQMLSSQL EYYFSRENLA
NDTYLLSQMD NDQYVPIWTV ANFNQVKKLT KDIKLITEVL RESPNVQVDE EGQKVRPNHK
RCIVILREIP ESTPLEDVKN LFSGEGCPRL ISCEFAHNSS WYVTFESDDD AQKAYRFLRE
EVREFQGKPI MARIKAKPMN RLPIPTVPGV GGIKNGYRTP PPTVYDPSSY TAGQQRFLYT
NGTTMPQTTM PAYPNQVVYQ PFYHGMMPWA TTSPAYFDMS SVFTMNGMTP HNTYTRSNTR
YNPRHRHRQR NGSDRSCLID PANPSNNSNN HHHHHHHHHH HHQPSSMPPL SNRSSHPPMT
GGGGNVSLNS TSTYHASSLP SSKPPSSSSS SSYQSGTKFH SSSSAVSSVE HAKGSSSSSS
SSAQDQDTAT ATVESSSSSS TSLSSAPSFP RHRNHRRTKD QDTKVAAGNN HSLPAIKESL
PASGGSNSSN CVSGGGRSSG VQFDLEAAAF PPLPGLDADH GKVSTDIGGS GTGTVESSSQ
NRLSDVVKGT AKLKAVIKDK ESGNQQQSSQ LQQQQTVAPP QPAIAAIASR STSPGANAGA
ETQGNAVGNA ASTNSSGAAH ILNPPTVNNE NTSSVDTAAA VLSTVIALTP PSSPDK
//
