ID E3BQ69_9VIBR Unreviewed; 543 AA.
AC E3BQ69;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Nitric oxide reductase regulator {ECO:0000313|EMBL:EFP94797.1};
GN ORFNames=VIBC2010_05780 {ECO:0000313|EMBL:EFP94797.1};
OS Vibrio caribbeanicus ATCC BAA-2122.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=796620 {ECO:0000313|EMBL:EFP94797.1, ECO:0000313|Proteomes:UP000002943};
RN [1] {ECO:0000313|EMBL:EFP94797.1, ECO:0000313|Proteomes:UP000002943}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-2122 {ECO:0000313|EMBL:EFP94797.1,
RC ECO:0000313|Proteomes:UP000002943};
RX PubMed=21930677; DOI=10.1099/ijs.0.032375-0;
RA Hoffmann M., Monday S.R., Allard M.W., Strain E.A., Whittaker P., Naum M.,
RA McCarthy P.J., Lopez J.V., Fischer M., Brown E.W.;
RT "Vibrio caribbeanicus sp. nov., isolated from the marine sponge
RT Scleritoderma cyanea.";
RL Int. J. Syst. Evol. Microbiol. 62:1736-1743(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFP94797.1}.
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DR EMBL; AEIU01000114; EFP94797.1; -; Genomic_DNA.
DR RefSeq; WP_009603335.1; NZ_AEIU01000114.1.
DR AlphaFoldDB; E3BQ69; -.
DR STRING; 796620.VIBC2010_05780; -.
DR eggNOG; COG2204; Bacteria.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000002943; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002943};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 211..441
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 543 AA; 60364 MW; FCB0092323D1DE45 CRC64;
MRSASQSDLS NALLAISQSL ADRTQLAQTL DAVLSAARQM TFAKHGIVYV LDQTGQALIP
SIVHHSEQAL SAHPWPALSF DRASQTDPFS YAIQNGEVVL INELYQYNGY DCETIYESEQ
ALGVKSSNLL AWPLVDDSKK TIGLLALLDL SIIDNESALS AFCQMAANSI RQAVWLENYG
HMIKDLSADN AALIRENQQL KQRKQSHYSG PIAESEQMLD VLRRLEKVLT LPVDVLLRGE
TGTGKEVIAK YIHQNSNRAN EPLIVQNCAA IPEQLLESEL FGHKKGAFTG ADKDKIGLFE
AAHGGTLFLD EIGDMPLLLQ AKLLRVLQER RVRPVGANKE IEVDVRVVAA THCHLMDKIQ
KGEFRADLFY RLNVFPITLP PLRERHADIL PLAEHFVKHS ANNLGLPAAP GLSAKVQSQL
MAYTYPGNVR ELKNIIERAL LLSDFETINQ IELGEVPEEP TISQVSSEPE PITAQVKEIE
PIISEVDDAS RSLKQAVSDY ERTVIIDCLN TTNWQMKRTA EQLSLPLSTL NHKMKKYDIS
IPK
//
