ID E3D784_GARV3 Unreviewed; 157 AA.
AC E3D784;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ADP39254.1};
GN OrderedLocusNames=HMPREF0421_21172 {ECO:0000313|EMBL:ADP39254.1};
OS Gardnerella vaginalis (strain ATCC 14019 / 317).
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Gardnerella.
OX NCBI_TaxID=525284 {ECO:0000313|EMBL:ADP39254.1, ECO:0000313|Proteomes:UP000001453};
RN [1] {ECO:0000313|EMBL:ADP39254.1, ECO:0000313|Proteomes:UP000001453}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14019 / 317 {ECO:0000313|Proteomes:UP000001453};
RX PubMed=20865041; DOI=10.1371/journal.pone.0012411;
RA Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G.,
RA Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A.,
RA Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E.,
RA Wilson B.A.;
RT "Comparative genomics of Gardnerella vaginalis strains reveals substantial
RT differences in metabolic and virulence potential.";
RL PLoS ONE 5:E12411-E12411(2010).
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DR EMBL; CP002104; ADP39254.1; -; Genomic_DNA.
DR RefSeq; WP_004113003.1; NC_014644.1.
DR RefSeq; YP_003986277.1; NC_014644.1.
DR AlphaFoldDB; E3D784; -.
DR KEGG; gvg:HMPREF0421_21172; -.
DR PATRIC; fig|525284.18.peg.1153; -.
DR HOGENOM; CLU_1668348_0_0_11; -.
DR OrthoDB; 5114244at2; -.
DR Proteomes; UP000001453; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.8.130; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR035569; Antitoxin_epsilon/PezA_dom_sf.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR46558:SF3; DNA-BINDING PROTEIN; 1.
DR PANTHER; PTHR46558; TRACRIPTIONAL REGULATORY PROTEIN-RELATED-RELATED; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:ADP39254.1}.
FT DOMAIN 6..60
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 157 AA; 18016 MW; A2F5702A90693698 CRC64;
MVSVNIRALR RSKKITQQEL AEALGVSRNS IVRYENGTSA ISTRLIDKIC DKFKVSLFDI
VHEKELSASD KYDLNMKIEV LKERGALLLA RLYKYEDSMN IQFDDSSNAW IAISDDLSDV
INTKIYTSTN FEDINRYIGY LDGIERLLEY VSCNKNS
//
