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Database: UniProt
Entry: E3G9Y3_ENTLS
LinkDB: E3G9Y3_ENTLS
Original site: E3G9Y3_ENTLS 
ID   E3G9Y3_ENTLS            Unreviewed;       800 AA.
AC   E3G9Y3;
DT   11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT   11-JAN-2011, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   OrderedLocusNames=Entcl_3669 {ECO:0000313|EMBL:ADO49910.1};
OS   Enterobacter lignolyticus (strain SCF1).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Pluralibacter.
OX   NCBI_TaxID=701347 {ECO:0000313|EMBL:ADO49910.1, ECO:0000313|Proteomes:UP000006872};
RN   [1] {ECO:0000313|Proteomes:UP000006872}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SCF1 {ECO:0000313|Proteomes:UP000006872};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N.,
RA   Mikhailova N., DeAngelis K., Arkin A.P., Chivian D., Edwards B., Woo H.,
RA   Hazen T.C., Woyke T.;
RT   "Complete sequence of Enterobacter cloacae SCF1.";
RL   Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADO49910.1, ECO:0000313|Proteomes:UP000006872}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SCF1 {ECO:0000313|EMBL:ADO49910.1,
RC   ECO:0000313|Proteomes:UP000006872};
RX   PubMed=22180812; DOI=10.4056/sigs.2104875;
RA   Deangelis K.M., D'Haeseleer P., Chivian D., Fortney J.L., Khudyakov J.,
RA   Simmons B., Woo H., Arkin A.P., Davenport K.W., Goodwin L., Chen A.,
RA   Ivanova N., Kyrpides N.C., Mavromatis K., Woyke T., Hazen T.C.;
RT   "Complete genome sequence of "Enterobacter lignolyticus" SCF1.";
RL   Stand. Genomic Sci. 5:69-85(2011).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
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DR   EMBL; CP002272; ADO49910.1; -; Genomic_DNA.
DR   RefSeq; WP_013367634.1; NC_014618.1.
DR   AlphaFoldDB; E3G9Y3; -.
DR   STRING; 701347.Entcl_3669; -.
DR   KEGG; esc:Entcl_3669; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_2_0_6; -.
DR   OMA; DYSHLDW; -.
DR   Proteomes; UP000006872; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|ARBA:ARBA00023237, ECO:0000256|HAMAP-
KW   Rule:MF_01411};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006872};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   SIGNAL          1..24
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT   CHAIN           25..800
FT                   /note="LPS-assembly protein LptD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT                   /id="PRO_5009010747"
FT   DOMAIN          53..194
FT                   /note="Organic solvent tolerance-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03968"
FT   DOMAIN          309..713
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
SQ   SEQUENCE   800 AA;  91057 MW;  F5B4346FAE87F3F1 CRC64;
     MKKRIPTLLA TMIASALYSQ QGAAADLASQ CMLGVPTYNR PLVQGDTNSL PVTINADHAK
     GNYPDNAVFT GNVDVNQGNS RLQADEVQLH QKEAPGQATP VRTVDALGNV HYDDNQVILT
     GPKAWSNLNT KDTNVWKGDY QMVGRQGRGT ADLMKQRGDN RYTILDNGTF TSCLPGANTW
     SVVGSEVIQD RQEQVAEIWN ARFKIGPIPV FYSPYLQLPI GDKRRSGFLI PNAKYGSTNG
     VEFYLPYYWN IAPNFDATIT PHYMDKRGGI MWENEFRYLT QAGTGLFEFD YLPSDKVYED
     EHPEDDNSRR WMFYWRHFGV MDQVWRFNVD YTKVSDANYF NDFSSKYGSS TDGYATQKFS
     AGYFIDNFDA TVSSKQFQVF DRENSNSYAA QPQLDVNYYY NDLGPFDAHV YGQAVKFENT
     NNNLPQATRL HLEPTLALPL SNGWGSLNTE VKLLATHYQQ SNLDEYRTYA KNQYNSNPSS
     DNARYLNAAN SLEDSVSRVL PQFKIDGKMV FERDMDWSQG YTQTLEPRVQ YLYVPYKDQS
     NIGVYDSTLL QSDYSGLFRD RTYSGLDRIA SANQVTTGLT TRVYDDHAVE RFNVSVGQIY
     YFTESRTGDE NVTWEKDDQR GSLVWAGDTY WRMTDQWGLR GGIQYDTRLD NVATASGTVE
     YRRDQDRLVQ LNYRYASPEY IQATLPSYAT SAQYNQGISQ VGMTASWPIV DRWSVVGAYY
     FDTNTRKSAD QMLGVQYSSC CYAIRVGYER KLNGWDTNSN ESKYDNTFGF SVELRGLSSN
     YGLGTQQMLR SNILPYQSSM
//
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