ID E3G9Y3_ENTLS Unreviewed; 800 AA.
AC E3G9Y3;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN OrderedLocusNames=Entcl_3669 {ECO:0000313|EMBL:ADO49910.1};
OS Enterobacter lignolyticus (strain SCF1).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Pluralibacter.
OX NCBI_TaxID=701347 {ECO:0000313|EMBL:ADO49910.1, ECO:0000313|Proteomes:UP000006872};
RN [1] {ECO:0000313|Proteomes:UP000006872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCF1 {ECO:0000313|Proteomes:UP000006872};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N.,
RA Mikhailova N., DeAngelis K., Arkin A.P., Chivian D., Edwards B., Woo H.,
RA Hazen T.C., Woyke T.;
RT "Complete sequence of Enterobacter cloacae SCF1.";
RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADO49910.1, ECO:0000313|Proteomes:UP000006872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCF1 {ECO:0000313|EMBL:ADO49910.1,
RC ECO:0000313|Proteomes:UP000006872};
RX PubMed=22180812; DOI=10.4056/sigs.2104875;
RA Deangelis K.M., D'Haeseleer P., Chivian D., Fortney J.L., Khudyakov J.,
RA Simmons B., Woo H., Arkin A.P., Davenport K.W., Goodwin L., Chen A.,
RA Ivanova N., Kyrpides N.C., Mavromatis K., Woyke T., Hazen T.C.;
RT "Complete genome sequence of "Enterobacter lignolyticus" SCF1.";
RL Stand. Genomic Sci. 5:69-85(2011).
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000256|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC Rule:MF_01411}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
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DR EMBL; CP002272; ADO49910.1; -; Genomic_DNA.
DR RefSeq; WP_013367634.1; NC_014618.1.
DR AlphaFoldDB; E3G9Y3; -.
DR STRING; 701347.Entcl_3669; -.
DR KEGG; esc:Entcl_3669; -.
DR eggNOG; COG1452; Bacteria.
DR HOGENOM; CLU_009039_2_0_6; -.
DR OMA; DYSHLDW; -.
DR Proteomes; UP000006872; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR InterPro; IPR005653; OstA-like_N.
DR PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR Pfam; PF04453; LptD; 1.
DR Pfam; PF03968; LptD_N; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237, ECO:0000256|HAMAP-
KW Rule:MF_01411};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01411};
KW Reference proteome {ECO:0000313|Proteomes:UP000006872};
KW Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT CHAIN 25..800
FT /note="LPS-assembly protein LptD"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT /id="PRO_5009010747"
FT DOMAIN 53..194
FT /note="Organic solvent tolerance-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03968"
FT DOMAIN 309..713
FT /note="LptD C-terminal"
FT /evidence="ECO:0000259|Pfam:PF04453"
SQ SEQUENCE 800 AA; 91057 MW; F5B4346FAE87F3F1 CRC64;
MKKRIPTLLA TMIASALYSQ QGAAADLASQ CMLGVPTYNR PLVQGDTNSL PVTINADHAK
GNYPDNAVFT GNVDVNQGNS RLQADEVQLH QKEAPGQATP VRTVDALGNV HYDDNQVILT
GPKAWSNLNT KDTNVWKGDY QMVGRQGRGT ADLMKQRGDN RYTILDNGTF TSCLPGANTW
SVVGSEVIQD RQEQVAEIWN ARFKIGPIPV FYSPYLQLPI GDKRRSGFLI PNAKYGSTNG
VEFYLPYYWN IAPNFDATIT PHYMDKRGGI MWENEFRYLT QAGTGLFEFD YLPSDKVYED
EHPEDDNSRR WMFYWRHFGV MDQVWRFNVD YTKVSDANYF NDFSSKYGSS TDGYATQKFS
AGYFIDNFDA TVSSKQFQVF DRENSNSYAA QPQLDVNYYY NDLGPFDAHV YGQAVKFENT
NNNLPQATRL HLEPTLALPL SNGWGSLNTE VKLLATHYQQ SNLDEYRTYA KNQYNSNPSS
DNARYLNAAN SLEDSVSRVL PQFKIDGKMV FERDMDWSQG YTQTLEPRVQ YLYVPYKDQS
NIGVYDSTLL QSDYSGLFRD RTYSGLDRIA SANQVTTGLT TRVYDDHAVE RFNVSVGQIY
YFTESRTGDE NVTWEKDDQR GSLVWAGDTY WRMTDQWGLR GGIQYDTRLD NVATASGTVE
YRRDQDRLVQ LNYRYASPEY IQATLPSYAT SAQYNQGISQ VGMTASWPIV DRWSVVGAYY
FDTNTRKSAD QMLGVQYSSC CYAIRVGYER KLNGWDTNSN ESKYDNTFGF SVELRGLSSN
YGLGTQQMLR SNILPYQSSM
//