ID E3I168_RHOVT Unreviewed; 321 AA.
AC E3I168;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ADP70081.1};
GN OrderedLocusNames=Rvan_0805 {ECO:0000313|EMBL:ADP70081.1}, Rvan_1235
GN {ECO:0000313|EMBL:ADP70502.1};
OS Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG
OS 4299).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Hyphomicrobiaceae; Rhodomicrobium.
OX NCBI_TaxID=648757 {ECO:0000313|EMBL:ADP70081.1, ECO:0000313|Proteomes:UP000001399};
RN [1] {ECO:0000313|EMBL:ADP70081.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ATCC 17100 {ECO:0000313|EMBL:ADP70081.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Chertkov O., Zhang Z., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G.,
RA Brown P.J.B., Brun Y.V., Woyke T.;
RT "Complete sequence of Rhodomicrobium vannielii ATCC 17100.";
RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000001399}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299
RC {ECO:0000313|Proteomes:UP000001399};
RX PubMed=21705585; DOI=10.1128/JB.05453-11;
RG US DOE Joint Genome Institute;
RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.;
RT "Genome sequences of eight morphologically diverse alphaproteobacteria.";
RL J. Bacteriol. 193:4567-4568(2011).
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DR EMBL; CP002292; ADP70081.1; -; Genomic_DNA.
DR EMBL; CP002292; ADP70502.1; -; Genomic_DNA.
DR RefSeq; WP_013418485.1; NC_014664.1.
DR AlphaFoldDB; E3I168; -.
DR KEGG; rva:Rvan_0805; -.
DR KEGG; rva:Rvan_1235; -.
DR eggNOG; COG2801; Bacteria.
DR HOGENOM; CLU_027402_15_1_5; -.
DR OrthoDB; 9809060at2; -.
DR Proteomes; UP000001399; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR047656; IS481-like_transpos.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033577; transpos_IS481; 1.
DR PANTHER; PTHR35004:SF7; INTEGRASE PROTEIN-RELATED; 1.
DR PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR Pfam; PF13683; rve_3; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001399}.
FT DOMAIN 127..301
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 321 AA; 36795 MW; D2D3DC93B14C42FC CRC64;
MGQILHGSAT TTEAVRRAIQ HSQESLRALA KRYGINTKTV SKWKKRSSVA DVPTGPKEPK
STVLSVEEEA IIVAFRKHTL LPLDDCLYAL QATIPHLTRS SLHRCLQRHG ISRLPDVEGD
KPARKKFKSY PIGYFHVDIA EVQTAEGKLY LYVAIDRTSK FAFVQLVKKT GRTSASAFLV
ALIEAVPYKI HTVLTDNGIQ FTFPPRYADG PTARYMTHMF DMRCSENGIE HRLTKVKHPW
TNGQVERMNR TIKEATVKRY HYDRHEQLET HLSDFINAYN FARRLKTLKG LTPYEFICKC
WTNEPERFKI DPIHQMPGLN S
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