ID E3LXD9_CAERE Unreviewed; 263 AA.
AC E3LXD9;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=CSD domain-containing protein {ECO:0000259|PROSITE:PS51857};
GN ORFNames=CRE_03839 {ECO:0000313|EMBL:EFO84632.1}, FL82_16237
GN {ECO:0000313|EMBL:OZF82936.1};
OS Caenorhabditis remanei (Caenorhabditis vulgaris).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281};
RN [1] {ECO:0000313|EMBL:EFO84632.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB4641 {ECO:0000313|EMBL:EFO84632.1};
RG The Caenorhabditis remanei Sequencing Consortium;
RA Wilson R.K.;
RT "PCAP assembly of the Caenorhabditis remanei genome.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000008281}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281};
RG Caenorhabditis remanei Sequencing Consortium;
RA Wilson R.K.;
RT "PCAP assembly of the Caenorhabditis remanei genome.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:OZF82936.1, ECO:0000313|Proteomes:UP000216624}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PX439 {ECO:0000313|EMBL:OZF82936.1,
RC ECO:0000313|Proteomes:UP000216624};
RA de Groot N.N.;
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DS268418; EFO84632.1; -; Genomic_DNA.
DR EMBL; NMWX01000195; OZF82936.1; -; Genomic_DNA.
DR RefSeq; XP_003111132.1; XM_003111084.1.
DR AlphaFoldDB; E3LXD9; -.
DR STRING; 31234.E3LXD9; -.
DR EnsemblMetazoa; CRE03839.1; CRE03839.1; WBGene00060368.
DR GeneID; 9801695; -.
DR KEGG; crq:GCK72_001298; -.
DR CTD; 9801695; -.
DR eggNOG; KOG3070; Eukaryota.
DR HOGENOM; CLU_092173_0_0_1; -.
DR InParanoid; E3LXD9; -.
DR OMA; YYHILIR; -.
DR OrthoDB; 325019at2759; -.
DR Proteomes; UP000008281; Unassembled WGS sequence.
DR Proteomes; UP000216624; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF136; CSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008281}.
FT DOMAIN 61..131
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 147..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..185
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..229
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 263 AA; 28863 MW; 5C8B5BB887C0D0AE CRC64;
MSDTANAAAE AIEKKLEKIS IEEKESLGNS EEKLRKHRIP TAERIRLWEE EQKAKRVLTT
GLQGKVKWYS VLRRYGFISR EDGEKDVFVH QTAIAKSATE KFYLRTLGDE EEVIFDLVEG
KNGPEAANVT GPAGENVVGS KYRHKLLSRF RKNRKPRQSV DGDESDSKAE STPKESTPQG
EDKKKPKKQR KNRTRKPKAQ KGAGDAADSS AVTDSSESAS ASGSPDSKSC SKIIDEEAGL
SKVDRCDSAL GASLGAQPID AQI
//
