ID E3LZB4_CAERE Unreviewed; 735 AA.
AC E3LZB4;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=CRE-YMEL-1 protein {ECO:0000313|EMBL:EFO86711.1};
GN Name=Cre-ymel-1 {ECO:0000313|EMBL:EFO86711.1};
GN ORFNames=CRE_04597 {ECO:0000313|EMBL:EFO86711.1};
OS Caenorhabditis remanei (Caenorhabditis vulgaris).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281};
RN [1] {ECO:0000313|Proteomes:UP000008281}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281};
RG Caenorhabditis remanei Sequencing Consortium;
RA Wilson R.K.;
RT "PCAP assembly of the Caenorhabditis remanei genome.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: In the C-terminal section; belongs to the peptidase M41
CC family. {ECO:0000256|ARBA:ARBA00010044}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the AAA ATPase
CC family. {ECO:0000256|ARBA:ARBA00010550}.
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DR EMBL; DS268419; EFO86711.1; -; Genomic_DNA.
DR RefSeq; XP_003110879.1; XM_003110831.1.
DR AlphaFoldDB; E3LZB4; -.
DR STRING; 31234.E3LZB4; -.
DR MEROPS; M41.A11; -.
DR EnsemblMetazoa; CRE04597.1; CRE04597.1; WBGene00078742.
DR eggNOG; KOG0734; Eukaryota.
DR HOGENOM; CLU_000688_19_2_1; -.
DR InParanoid; E3LZB4; -.
DR OMA; WNQYESD; -.
DR OrthoDB; 9585at2759; -.
DR Proteomes; UP000008281; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR CDD; cd19501; RecA-like_FtsH; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.58.760; Peptidase M41; 1.
DR HAMAP; MF_01458; FtsH; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR005936; FtsH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000642; Peptidase_M41.
DR InterPro; IPR037219; Peptidase_M41-like.
DR PANTHER; PTHR23076:SF97; ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1; 1.
DR PANTHER; PTHR23076; METALLOPROTEASE M41 FTSH; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF01434; Peptidase_M41; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF140990; FtsH protease domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000008281};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 197..216
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 276..413
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
SQ SEQUENCE 735 AA; 81800 MW; 03A1008BF63D1B0D CRC64;
MQAVNLNIGG LLQNTGLLRS RNGISRKPLD IDKTATSLCR IYYSVWRQFS TATPSEISKM
SQNLRDSMLT RRMARKSEIF LNYDDAMIRI VPSTSSFYVQ RRGFRTRKQT FGVGNPGKTQ
EEEVKSPLTY ISELLVGKKV KTSEGGVEKW NQYESDLKKL PEGQQRTYTD GFVKGLLSNG
TSGAGKDVKK SSTLTRFYIF LVFCIFFGYL TGRIRVRVGD RQIGSLFFSN PQEVNPEDVQ
VTFDDVRGMD EAKLEVEEIV DYLKDPEKYS RLGGRLPKGV LLVGPPGTGK TLLARAIAGE
AQVPFFHTSG SEFDEVLVGQ GARRVRDLFD KAKARAPCII FIDEIDSVGS KRVSNSIHPY
ANQTINQLLS EMDGFTRNEG IIVIAATNRV EDLDKALLRP GRFDVRVTVP KPDLAGRVDI
FNFYLSKIVH NGAIDPNILA KGSTGFTGAD IENMVNQAAL KAATDNAVEV TMAYLDEARD
RVLMGPARTG GRIPDEEANR NTAYHEAGHT LVSLYTKDAT PLHKVTIIPR GQSLGHTAML
PDKDSYQLTK AQMLATLDVM MGGRVAEELI FGEDKVTTGA ADDLSKATQL AIQMVKVFGM
SDKVGLRDFT AEDRDSSLVK VSDLSPQTAE LIDGEINRVL QESYKRAKVI LETKKVYIRV
SDIYLFFNSF QKEHQLLAEA LLEYETLSAD EVRRVISGQK IKRPTPAAVK KSNEMRKNQP
SLVLHLFEEE GRGKQ
//