ID E3QKJ9_COLGM Unreviewed; 815 AA.
AC E3QKJ9;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Transcription factor BYE1 {ECO:0000256|ARBA:ARBA00021616};
GN ORFNames=GLRG_06531 {ECO:0000313|EMBL:EFQ31387.1};
OS Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) (Maize
OS anthracnose fungus) (Glomerella graminicola).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC Colletotrichum graminicola species complex.
OX NCBI_TaxID=645133 {ECO:0000313|Proteomes:UP000008782};
RN [1] {ECO:0000313|Proteomes:UP000008782}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M1.001 / M2 / FGSC 10212 {ECO:0000313|Proteomes:UP000008782};
RX PubMed=22885923; DOI=10.1038/ng.2372;
RA O'Connell R.J., Thon M.R., Hacquard S., Amyotte S.G., Kleemann J.,
RA Torres M.F., Damm U., Buiate E.A., Epstein L., Alkan N., Altmueller J.,
RA Alvarado-Balderrama L., Bauser C.A., Becker C., Birren B.W., Chen Z.,
RA Choi J., Crouch J.A., Duvick J.P., Farman M.A., Gan P., Heiman D.,
RA Henrissat B., Howard R.J., Kabbage M., Koch C., Kracher B., Kubo Y.,
RA Law A.D., Lebrun M.-H., Lee Y.-H., Miyara I., Moore N., Neumann U.,
RA Nordstroem K., Panaccione D.G., Panstruga R., Place M., Proctor R.H.,
RA Prusky D., Rech G., Reinhardt R., Rollins J.A., Rounsley S., Schardl C.L.,
RA Schwartz D.C., Shenoy N., Shirasu K., Sikhakolli U.R., Stueber K.,
RA Sukno S.A., Sweigard J.A., Takano Y., Takahara H., Trail F.,
RA van der Does H.C., Voll L.M., Will I., Young S., Zeng Q., Zhang J.,
RA Zhou S., Dickman M.B., Schulze-Lefert P., Ver Loren van Themaat E.,
RA Ma L.-J., Vaillancourt L.J.;
RT "Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered
RT by genome and transcriptome analyses.";
RL Nat. Genet. 44:1060-1065(2012).
CC -!- FUNCTION: Negative regulator of transcription elongation.
CC {ECO:0000256|ARBA:ARBA00002311}.
CC -!- SIMILARITY: Belongs to the BYE1 family.
CC {ECO:0000256|ARBA:ARBA00011050}.
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DR EMBL; GG697355; EFQ31387.1; -; Genomic_DNA.
DR RefSeq; XP_008095407.1; XM_008097216.1.
DR AlphaFoldDB; E3QKJ9; -.
DR STRING; 645133.E3QKJ9; -.
DR EnsemblFungi; EFQ31387; EFQ31387; GLRG_06531.
DR GeneID; 24411896; -.
DR VEuPathDB; FungiDB:GLRG_06531; -.
DR eggNOG; KOG1634; Eukaryota.
DR HOGENOM; CLU_009292_0_0_1; -.
DR OrthoDB; 5491784at2759; -.
DR Proteomes; UP000008782; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd21538; SPOC_TFIIS; 1.
DR Gene3D; 1.10.472.30; Transcription elongation factor S-II, central domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR012921; SPOC_C.
DR InterPro; IPR003618; TFIIS_cen_dom.
DR InterPro; IPR036575; TFIIS_cen_dom_sf.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR11477:SF20; PROTEIN PARTNER OF SNF, ISOFORM B; 1.
DR PANTHER; PTHR11477; TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF20826; PHD_5; 1.
DR Pfam; PF07744; SPOC; 1.
DR Pfam; PF07500; TFIIS_M; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00510; TFS2M; 1.
DR SUPFAM; SSF46942; Elongation factor TFIIS domain 2; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51321; TFIIS_CENTRAL; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008782};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 228..353
FT /note="TFIIS central"
FT /evidence="ECO:0000259|PROSITE:PS51321"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 109..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 360..398
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 432..451
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 637..730
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 786..815
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..135
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..186
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 637..685
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 800..815
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 815 AA; 89533 MW; 52DB5C752A526A74 CRC64;
MLRAGEPEPR RSVRATKGQH TKAFDDQPIE PPKKRGRKKK QEEEPEEEII RCVCGATEQD
GDSEEPWIAC DKCTAWQHNV CMGMSVFTED LPKNYYCEQC APQDHKELLS AMAQGERPWE
TRRKVYEEEQ NEKKKKKKKG GRGGKRASDP KEDLSQDTRS NKAEDSPAPS ENKEKKDKKD
GGASKAATGK RKTPAPKQRK VSEPEPSPIV GYTAPADLDA KVTDLQEDRK GPAQLLQKAI
TGILTVAVKD KSVTLPKDTT AAAKAERLAL EIERAVHDAH PDRSQYAAQA RILYANMRMN
GDLTKRLLKR TLSPLMLATM TADELATKER QEANAHLKAI SEKQSILITD DAPRVRRTHK
GEEIVESDSF QQNDDGRTFA RRPSGREGGE PNSENSGELS AHLGLHIDTH GARHSPKHPD
FDINKVYATV KSPTSAHNRR PSAPVHGPGV DLDVDRLLQE ETDSPPYSPT DETDPDVVWR
GHLVMSSIAD FPASAKFVGG ANLSNTIGLP WTSLIPKRLA VAGRIDEQKA IEYLCGLRYA
DQTDIVVVAV SPTSEGSRRE FQSLFDYFVS KKRYAVVGDK GVGNVRDTYL VPVPPGEGNV
PEFMLNFSDN LVPQKRTEPM LLAVFVYRNT LRQPQLGGAA SQSPIANTPT PTQAGFPSRH
PSVSGPAFSP TVGQGSFQQP GQAPFGNNGY VPPEHPTQGA HQVVPPNQPP SGYVANRGPE
TEKQQRQEQG QVLAQEVLGP LINSPTVKFL LPQAYQMSRT EWDVIRGILE RDPRARDDLT
YLSQLLEKQP SVDGKSGDGP PTTAPQSSQG VAPSA
//
