ID E4NLQ1_HALBP Unreviewed; 408 AA.
AC E4NLQ1;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Transposase, IS605 ORFB family, central region {ECO:0000313|EMBL:ADQ67254.1, ECO:0000313|EMBL:ELY28470.1};
GN OrderedLocusNames=Hbor_10730 {ECO:0000313|EMBL:ADQ66664.1}, Hbor_16860
GN {ECO:0000313|EMBL:ADQ67254.1};
GN ORFNames=C499_07405 {ECO:0000313|EMBL:ELY28470.1};
OS Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 /
OS KCTC 4070 / PR3).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC Haloferacaceae; Halogeometricum.
OX NCBI_TaxID=469382 {ECO:0000313|EMBL:ADQ67254.1, ECO:0000313|Proteomes:UP000006663};
RN [1] {ECO:0000313|EMBL:ADQ67254.1, ECO:0000313|Proteomes:UP000006663}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700274 / DSM 11551 / JCM 10706 / KCTC 4070 / PR3
RC {ECO:0000313|Proteomes:UP000006663}, and PR 3
RC {ECO:0000313|EMBL:ADQ67254.1};
RX PubMed=21304651; DOI=10.4056/sigs.23264;
RA Malfatti S., Tindall B.J., Schneider S., Fahnrich R., Lapidus A.,
RA Labuttii K., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S.,
RA Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Anderson I.,
RA Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K.,
RA D'haeseleer P., Goker M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.P., Chain P.;
RT "Complete genome sequence of Halogeometricum borinquense type strain
RT (PR3).";
RL Stand. Genomic Sci. 1:150-159(2009).
RN [2] {ECO:0000313|EMBL:ELY28470.1, ECO:0000313|Proteomes:UP000011585}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 11551 {ECO:0000313|EMBL:ELY28470.1,
RC ECO:0000313|Proteomes:UP000011585};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP001690; ADQ66664.1; -; Genomic_DNA.
DR EMBL; CP001690; ADQ67254.1; -; Genomic_DNA.
DR EMBL; AOHT01000024; ELY28470.1; -; Genomic_DNA.
DR RefSeq; WP_006054798.1; NZ_AOHT01000024.1.
DR AlphaFoldDB; E4NLQ1; -.
DR STRING; 469382.Hbor_10730; -.
DR GeneID; 9993505; -.
DR KEGG; hbo:Hbor_10730; -.
DR KEGG; hbo:Hbor_16860; -.
DR PATRIC; fig|469382.19.peg.1446; -.
DR eggNOG; arCOG00684; Archaea.
DR HOGENOM; CLU_032903_0_1_2; -.
DR OrthoDB; 33505at2157; -.
DR Proteomes; UP000006663; Chromosome.
DR Proteomes; UP000011585; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006663};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 187..287
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 301..369
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT COILED 213..243
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 408 AA; 46990 MW; AB83203CA1A68AFE CRC64;
MEYSHRYHAY PTQAVAERLE YHIDVHRQAY NYTRYEYENV DADNIGSAYK HHYRLPDWKD
EFSVFSDVNS KALQRTVTRF YQNLSNLSKK KQNGNKVGKL KWKSPTEYQS MTYSQSGFEL
KNTSGRHATL ELSKVGDIRI RYHREIHDQA EIKEVTIKKE TTGEWFVSFG LETDDADLPE
KPDVDSLNTS NSVGIDLGIL NYIHTSDGKT VDWLDLEDDY ERLRREQRKL SRKEKGSNNY
EKQRVEVAKV KRHIRRKVLD YQHKLTTWLV KEYDAVFVED LNVQCMLQDD GNARNKQDVA
WRQFITLLEY KGDLHGTHVV QVDARGTTKE CASCGVETAK PIWVREHSCP ACGFETDRDA
NASLNVLQRG FSALGLGWPE STPVETALPT DTHSVSAKRV VETGSLGA
//
