ID E4RQU6_LEAB4 Unreviewed; 243 AA.
AC E4RQU6;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ADQ18389.1};
GN OrderedLocusNames=Lbys_0420 {ECO:0000313|EMBL:ADQ16196.1}, Lbys_0535
GN {ECO:0000313|EMBL:ADQ16305.1}, Lbys_2406
GN {ECO:0000313|EMBL:ADQ18079.1}, Lbys_2536
GN {ECO:0000313|EMBL:ADQ18198.1}, Lbys_2727
GN {ECO:0000313|EMBL:ADQ18389.1};
OS Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS 106382 / 4M15).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Leadbetterella.
OX NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ18389.1, ECO:0000313|Proteomes:UP000007435};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Leadbetterella byssophila DSM 17132.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ18389.1, ECO:0000313|Proteomes:UP000007435}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132 {ECO:0000313|EMBL:ADQ18389.1}, and DSM 17132 / JCM
RC 16389 / KACC 11308 / NBRC 106382 / 4M15
RC {ECO:0000313|Proteomes:UP000007435};
RX PubMed=21475582; DOI=10.4056/sigs.1413518;
RA Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Leadbetterella byssophila type strain
RT (4M15).";
RL Stand. Genomic Sci. 4:2-12(2011).
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DR EMBL; CP002305; ADQ16196.1; -; Genomic_DNA.
DR EMBL; CP002305; ADQ16305.1; -; Genomic_DNA.
DR EMBL; CP002305; ADQ18079.1; -; Genomic_DNA.
DR EMBL; CP002305; ADQ18198.1; -; Genomic_DNA.
DR EMBL; CP002305; ADQ18389.1; -; Genomic_DNA.
DR RefSeq; WP_013407251.1; NC_014655.1.
DR AlphaFoldDB; E4RQU6; -.
DR STRING; 649349.Lbys_0420; -.
DR KEGG; lby:Lbys_0420; -.
DR KEGG; lby:Lbys_0535; -.
DR KEGG; lby:Lbys_2406; -.
DR KEGG; lby:Lbys_2536; -.
DR KEGG; lby:Lbys_2727; -.
DR eggNOG; COG2801; Bacteria.
DR HOGENOM; CLU_027402_31_0_10; -.
DR Proteomes; UP000007435; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR PANTHER; PTHR46889:SF1; TRANSPOSASE INSO FOR INSERTION SEQUENCE ELEMENT IS911B-RELATED; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007435}.
FT DOMAIN 67..236
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 243 AA; 29149 MW; 0C53D208135F64BE CRC64;
MDYILQETKT LLEGEFVDYG YYKTYRYLNQ EKGLRIGAYR TYKLMKENNL LKFQRSNTKR
ISRNWVKELV PIVQREFAFL EFDIKYVYIQ GKRTNAQVLT ILDVFSRWQL GQYIANSIKS
EDVINLFEQI LQTYPMPKQF IVRNDNGSQF EALIVQEYLK QKGITQEFTK PATPQQNGHI
EAYHSILESA VCQRFEFESL QEFKQVMIRW KKFYNFERIH GGLHYKSPRK FLESIGVKID
PNW
//
