ID E4RS89_LEAB4 Unreviewed; 842 AA.
AC E4RS89;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE SubName: Full=ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADQ16741.1};
GN OrderedLocusNames=Lbys_1011 {ECO:0000313|EMBL:ADQ16741.1};
OS Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS 106382 / 4M15).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Leadbetterella.
OX NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ16741.1, ECO:0000313|Proteomes:UP000007435};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Leadbetterella byssophila DSM 17132.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ16741.1, ECO:0000313|Proteomes:UP000007435}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15
RC {ECO:0000313|Proteomes:UP000007435};
RX PubMed=21475582; DOI=10.4056/sigs.1413518;
RA Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Leadbetterella byssophila type strain
RT (4M15).";
RL Stand. Genomic Sci. 4:2-12(2011).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CP002305; ADQ16741.1; -; Genomic_DNA.
DR RefSeq; WP_013407792.1; NC_014655.1.
DR AlphaFoldDB; E4RS89; -.
DR STRING; 649349.Lbys_1011; -.
DR KEGG; lby:Lbys_1011; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_1_10; -.
DR OMA; ERMKAVM; -.
DR OrthoDB; 9803641at2; -.
DR Proteomes; UP000007435; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000007435};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 1..148
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 441..476
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT REGION 149..185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 437..494
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 842 AA; 94612 MW; C78FA8C130264DFB CRC64;
MEPKFSQRVK EVISLAKEEA LRLGHDYIGT EHLILGMIRE GEGLGLGLIQ KAGVNPEELR
LSIENSTRGT ATNTIKNLAN IPLTRQSEKV LKITHLEAKI FKSNVIGTEH LLLAVLRDDD
NLGCQILHKF HVDYKLIKEM LEYQLTGIEP RMESQDTDDE DKNFGSGSGF GQKSDTKSGE
KSRTPILDNF GRDLTKMAEI GKLDPIVGRE KEIERVAQIL SRRKKNNPIL IGEPGVGKTA
IAEGLALRIV QKKVSRVLFG KRVVTLDLAS LVAGTKYRGQ FEERMKAVMQ EIEKNPQIIL
FIDEIHTIVG AGGASGSLDA SNMFKPALAR GDIQCVGATT LDEYRQYIEK DGALARRFQM
VMVDATSIDE TIEILHNIKS KYEDHHNVTY TDEAIELAVK YSERYITDRF LPDKAIDVID
EVGARVHIKN INVPQEVVDL ENAVEEIKQE KNRVVKSQRY EEAAQLRDRE KKLIDQLENA
KAAWEEESKR QRFNVTEDHV AEVIAMMTGI PVKRVNMNEG EKILNMGQNL KGKVIGQDPA
VEKLVKAIQR TRVGLKDPKK PIGSFIFLGP TGVGKTELAK KLAEYLFDKE DALVRIDMSE
YMEKFSISRL VGAPPGYVGY EEGGQLTEKV RRKPYSVVLL DEIEKAHPDV FNILLQVLDD
GILTDSLGRR VDFRNTIIIM TSNIGVRDLK DFGSGIGFAT KSRMENQDDM VKSTIQNALK
KSFSPEFLNR LDDVIVFNSL SKEDIFKIID ISLGKLLSRI QNLGYSLELT ESAKSFLSEK
GYDQQYGARP LNRAIQKYVE DPLAEEILRG NLSEGDTILV DHQEGEEQLS FSKKSKTEEV
EP
//