ID E4RWC8_LEAB4 Unreviewed; 500 AA.
AC E4RWC8;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE SubName: Full=Glycoside hydrolase family 43 {ECO:0000313|EMBL:ADQ18001.1};
GN OrderedLocusNames=Lbys_2325 {ECO:0000313|EMBL:ADQ18001.1};
OS Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS 106382 / 4M15).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Leadbetterella.
OX NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ18001.1, ECO:0000313|Proteomes:UP000007435};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Leadbetterella byssophila DSM 17132.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ18001.1, ECO:0000313|Proteomes:UP000007435}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15
RC {ECO:0000313|Proteomes:UP000007435};
RX PubMed=21475582; DOI=10.4056/sigs.1413518;
RA Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Leadbetterella byssophila type strain
RT (4M15).";
RL Stand. Genomic Sci. 4:2-12(2011).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family.
CC {ECO:0000256|ARBA:ARBA00009865, ECO:0000256|RuleBase:RU361187}.
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DR EMBL; CP002305; ADQ18001.1; -; Genomic_DNA.
DR RefSeq; WP_013409042.1; NC_014655.1.
DR AlphaFoldDB; E4RWC8; -.
DR STRING; 649349.Lbys_2325; -.
DR CAZy; GH43; Glycoside Hydrolase Family 43.
DR KEGG; lby:Lbys_2325; -.
DR eggNOG; COG3507; Bacteria.
DR HOGENOM; CLU_016508_1_0_10; -.
DR OMA; LPLVWQW; -.
DR OrthoDB; 9801455at2; -.
DR Proteomes; UP000007435; Chromosome.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd09001; GH43_FsAxh1-like; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR041542; GH43_C2.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR PANTHER; PTHR42812; BETA-XYLOSIDASE; 1.
DR PANTHER; PTHR42812:SF2; HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G00930)-RELATED; 1.
DR Pfam; PF17851; GH43_C2; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF75005; Arabinanase/levansucrase/invertase; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361187};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361187};
KW Reference proteome {ECO:0000313|Proteomes:UP000007435};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..16
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 17..500
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003188496"
FT DOMAIN 307..497
FT /note="Beta-xylosidase C-terminal Concanavalin A-like"
FT /evidence="ECO:0000259|Pfam:PF17851"
FT ACT_SITE 27
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT ACT_SITE 191
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT SITE 136
FT /note="Important for catalytic activity, responsible for
FT pKa modulation of the active site Glu and correct
FT orientation of both the proton donor and substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-2"
SQ SEQUENCE 500 AA; 56591 MW; D07DDFFE369F5F6B CRC64;
MRRLILLLLL PFWSSAQLPI IYADVPDPSM IRVGDTYYMS STTMHMNPGV PVMKSKDLVN
WEIIHYAYEE LEPDLDLGTG KSMYGKGSWA SSLRYHEGTY YLSTFALNTG KTYIFTTKDI
EKGPWERKSF QPAFHDHTLF FEDGKPYLIY GAGKLMLVPL KEDLTGVAGK ERVLIENANL
PAGPNIGLNA EGSQLFKHDG KYYLFNIVWP KGGMRTVLIH RAESLQGPWE GRVAFQDMGI
AQGGMIDTPD GKWWAYLFRD KGSVGRVPYW VPIQWKDGWP VIGDDGKFPK DLPLPAGKGL
IPGIVNSDEF TSNTLSLVWQ WNHNADSTRW SLTDRKGFMR LKTGQVGAPL LQTRNMLTQR
TIGPKCTGEV KIDVRGLKEG DVAGLIALQS DYAWVGVKVE NGQRFLVVEK EEEGKKSELL
KRPWKGNTVF VRIHCDFTDF KDEATFSFSS DGKRWEKASG SLAMKYKLTH FMGYRFGLFV
QATKSEGGYA DFDYYKINEL
//