ID E4T0N7_PALPW Unreviewed; 885 AA.
AC E4T0N7;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Glycoside hydrolase family 9 {ECO:0000313|EMBL:ADQ81101.1};
GN OrderedLocusNames=Palpr_2972 {ECO:0000313|EMBL:ADQ81101.1};
OS Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae;
OC Paludibacter.
OX NCBI_TaxID=694427 {ECO:0000313|EMBL:ADQ81101.1, ECO:0000313|Proteomes:UP000008718};
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=WB4;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C.,
RA Han C., Tapia R., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Paludibacter propionicigenes DSM 17365.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ81101.1, ECO:0000313|Proteomes:UP000008718}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17365 / JCM 13257 / WB4
RC {ECO:0000313|Proteomes:UP000008718};
RX PubMed=21475585; DOI=10.4056/sigs.1503846;
RA Gronow S., Munk C., Lapidus A., Nolan M., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D.,
RA Brambilla E., Rohde M., Goker M., Detter J.C., Woyke T., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Paludibacter propionicigenes type strain
RT (WB4).";
RL Stand. Genomic Sci. 4:36-44(2011).
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DR EMBL; CP002345; ADQ81101.1; -; Genomic_DNA.
DR RefSeq; WP_013446470.1; NC_014734.1.
DR AlphaFoldDB; E4T0N7; -.
DR STRING; 694427.Palpr_2972; -.
DR CAZy; GH9; Glycoside Hydrolase Family 9.
DR GeneID; 78492435; -.
DR KEGG; ppn:Palpr_2972; -.
DR eggNOG; COG0726; Bacteria.
DR HOGENOM; CLU_006010_1_0_10; -.
DR OrthoDB; 9808897at2; -.
DR Proteomes; UP000008718; Chromosome.
DR GO; GO:0008810; F:cellulase activity; IEA:InterPro.
DR GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR CDD; cd10917; CE4_NodB_like_6s_7s; 1.
DR CDD; cd02850; E_set_Cellulase_N; 1.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 3.20.20.370; Glycoside hydrolase/deacetylase; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR004197; Cellulase_Ig-like.
DR InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR InterPro; IPR001701; Glyco_hydro_9.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR002509; NODB_dom.
DR PANTHER; PTHR22298; ENDO-1,4-BETA-GLUCANASE; 1.
DR PANTHER; PTHR22298:SF29; ENDOGLUCANASE; 1.
DR Pfam; PF02927; CelD_N; 1.
DR Pfam; PF00759; Glyco_hydro_9; 1.
DR Pfam; PF01522; Polysacc_deac_1; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF88713; Glycoside hydrolase/deacetylase; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
DR PROSITE; PS51677; NODB; 1.
PE 4: Predicted;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:ADQ81101.1};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW Reference proteome {ECO:0000313|Proteomes:UP000008718}.
FT DOMAIN 653..861
FT /note="NodB homology"
FT /evidence="ECO:0000259|PROSITE:PS51677"
SQ SEQUENCE 885 AA; 100157 MW; 3B183CDF4364B399 CRC64;
MGKRIVLVFL SFFCISMCTY GIDAWIRINQ MGYLPHALKK AVFISESAQD IKQFSIYDAL
TNQELATFNT VVSKEEFENF KSTYVLNFSS FKQQGAFYIK AGTAYSPTIY INNNIYQGTA
DFILNFLRLQ RNGYNPDLYS EVHQYNTYDA EDIIPAKKET SETSYDQDFL KSLKAKNSRY
RNIHLPVTTP EPVKPKSLDV RGGWLESTDF LQYGATSSTA VLQLLFAYQL NPTAFSDKYD
AYGYNKPNDI PDILDEAKWG LDWLMKMYPT KDVLYHQIAN DFKHEKFGTS KVETADAESD
EAISRPVYTA TGRPQGLFGY KNNSTGIASI AGKYSSAFSL GAELLSVYYP TFADSLKAKA
VEAYQYGKEN PGVCQSVPGR SPYYFEEENW KDDMELAAAQ LYRLTYDGSY LREAAEFGRI
EPISPWMCTD TTTYHQWYPY LNLGHYVIAN VENPGYRKEF LQNLLSGIQR VNNAAADNPF
NIAVPMVLGS NNMVTAIASQ CRLYRALTND STYLSLETSL IDWLFGCNPW GTSMVIGLPQ
LGVYPSDPHS TLAHNSHVPL SGALVNGPVN ASTFKTLIGD KLSKDDMYDQ VQSDWAVYHD
DNADYATNEP TIDGTAALAY LLSSKQMEAS PDIVAETNKY KFGAITNTDM SKKQISLVFA
GSEFSDGART ILNTLKSLKI KASFFFTGDF YRNKNNKQYI EEIQKEGYYL GANSDKNLLY
CSFLKRDSLF VTKNEFLNDL KNNYLEMEKF GITKSKAPFF LPPSEWYNNT ISQWCNEFGL
QLISPTPKTM SNYDVSTPDM RDNYLSSTEI YNNIMELESS QGLNGNILVF HMGADNKRKD
KFYTKLHMLL STIAKSGYEF VDLFTATNMF SNSAVTVDKK QKRKN
//
