ID E4T6Q0_PALPW Unreviewed; 246 AA.
AC E4T6Q0;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=RDD domain containing protein {ECO:0000313|EMBL:ADQ80394.1};
GN OrderedLocusNames=Palpr_2258 {ECO:0000313|EMBL:ADQ80394.1};
OS Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae;
OC Paludibacter.
OX NCBI_TaxID=694427 {ECO:0000313|EMBL:ADQ80394.1, ECO:0000313|Proteomes:UP000008718};
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=WB4;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C.,
RA Han C., Tapia R., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Paludibacter propionicigenes DSM 17365.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ80394.1, ECO:0000313|Proteomes:UP000008718}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17365 / JCM 13257 / WB4
RC {ECO:0000313|Proteomes:UP000008718};
RX PubMed=21475585; DOI=10.4056/sigs.1503846;
RA Gronow S., Munk C., Lapidus A., Nolan M., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D.,
RA Brambilla E., Rohde M., Goker M., Detter J.C., Woyke T., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Paludibacter propionicigenes type strain
RT (WB4).";
RL Stand. Genomic Sci. 4:36-44(2011).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP002345; ADQ80394.1; -; Genomic_DNA.
DR RefSeq; WP_013445763.1; NC_014734.1.
DR AlphaFoldDB; E4T6Q0; -.
DR STRING; 694427.Palpr_2258; -.
DR GeneID; 78491774; -.
DR KEGG; ppn:Palpr_2258; -.
DR eggNOG; COG1714; Bacteria.
DR HOGENOM; CLU_054176_2_0_10; -.
DR OrthoDB; 9814143at2; -.
DR Proteomes; UP000008718; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR010432; RDD.
DR PANTHER; PTHR38480; SLR0254 PROTEIN; 1.
DR PANTHER; PTHR38480:SF1; SLR0254 PROTEIN; 1.
DR Pfam; PF06271; RDD; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008718};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 61..80
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 116..136
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 18..149
FT /note="RDD"
FT /evidence="ECO:0000259|Pfam:PF06271"
SQ SEQUENCE 246 AA; 27986 MW; 07B312159A231957 CRC64;
MSKLYVTTTQ NVKLFFTPAS VGDRMLAYGI DLLIKIAYVF IVVMVYVYVG SIGSILDGHD
WLSIALFSLF MLPVVFYTLV SETLMEGQTF GKKLIKIKVI KIDGFQAGFI DYLTRWIFAI
VDINIGYVPG LISMVVTTHT RRLGDLAAGT AVITEKSKYD ISHTILMDVD DSYKPYFAQH
QVILFSDNDI RIIKENADIA FAQVNYSIME KLTRKIESVM NIQNPFKTER ELINTLLKDY
DYHTGK
//
