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Database: UniProt
Entry: E4XG95_OIKDI
LinkDB: E4XG95_OIKDI
Original site: E4XG95_OIKDI 
ID   E4XG95_OIKDI            Unreviewed;       800 AA.
AC   E4XG95;
DT   08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT   08-FEB-2011, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN   ORFNames=GSOID_T00010503001 {ECO:0000313|EMBL:CBY09693.1};
OS   Oikopleura dioica (Tunicate).
OC   Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Copelata;
OC   Oikopleuridae; Oikopleura.
OX   NCBI_TaxID=34765 {ECO:0000313|EMBL:CBY09693.1};
RN   [1] {ECO:0000313|EMBL:CBY09693.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21097902; DOI=10.1126/science.1194167;
RA   Denoeud F., Henriet S., Mungpakdee S., Aury J.M., Da Silva C.,
RA   Brinkmann H., Mikhaleva J., Olsen L.C., Jubin C., Canestro C.,
RA   Bouquet J.M., Danks G., Poulain J., Campsteijn C., Adamski M., Cross I.,
RA   Yadetie F., Muffato M., Louis A., Butcher S., Tsagkogeorga G., Konrad A.,
RA   Singh S., Jensen M.F., Cong E.H., Eikeseth-Otteraa H., Noel B.,
RA   Anthouard V., Porcel B.M., Kachouri-Lafond R., Nishino A., Ugolini M.,
RA   Chourrout P., Nishida H., Aasland R., Huzurbazar S., Westhof E., Delsuc F.,
RA   Lehrach H., Reinhardt R., Weissenbach J., Roy S.W., Artiguenave F.,
RA   Postlethwait J.H., Manak J.R., Thompson E.M., Jaillon O., Du Pasquier L.,
RA   Boudinot P., Liberles D.A., Volff J.N., Philippe H., Lenhard B.,
RA   Roest Crollius H., Wincker P., Chourrout D.;
RT   "Plasticity of animal genome architecture unmasked by rapid evolution of a
RT   pelagic tunicate.";
RL   Science 330:1381-1385(2010).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001556};
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC       subfamily. {ECO:0000256|ARBA:ARBA00010379}.
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DR   EMBL; FN653047; CBY09693.1; -; Genomic_DNA.
DR   AlphaFoldDB; E4XG95; -.
DR   InParanoid; E4XG95; -.
DR   Proteomes; UP000001307; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   CDD; cd18787; SF2_C_DEAD; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR012541; DBP10_C.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR   PANTHER; PTHR47959:SF8; RNA HELICASE; 1.
DR   Pfam; PF08147; DBP10CT; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM01123; DBP10CT; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001307}.
FT   DOMAIN          37..65
FT                   /note="DEAD-box RNA helicase Q"
FT                   /evidence="ECO:0000259|PROSITE:PS51195"
FT   DOMAIN          68..239
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          266..422
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          1..40
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          661..776
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           37..65
FT                   /note="Q motif"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT   COMPBIAS        702..729
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   800 AA;  89706 MW;  8FB3675E355E4E29 CRC64;
     MSDIESGPSG SDSEPDINEE ESRKLVQQQN RKGKKSGGFQ SMGLSHGVFK GIFRRGYKIP
     TPIQRKCIPK IIDGKDVVAM ARTGSGKTAA FLIPILERLK KREQRGPRVV ILSPTRELAI
     QTAKFTNDLS KFCNLSVSVI LGGDSLDNQF TQLDQNPDIV IATPGRLLHL LVEMDRRLNY
     VKMVVFDEAD QLFDLGFTEQ LNEILGRLPE SKQTLLFSAT LPNKILEFAK AGLRDPELIR
     LDVERRLPEN LQLTFFHARH EDKIAALLHL LGNVIKADEK TVIFVATKHH VELVKLFLER
     YNYTPCYIYS SMDPFARKLM ISRFRHEDED PDKTTNILIT TDIAARGIDI PLLDAVVNFH
     FAAKAKTFIH RVGRVARAGR PGHAYSIVSN EEMPYLLDLH VFLGRSLGFC KDGDKSWDGK
     IGRYPQSAID DEADIVSTAI KESADIQSQI KSAENGYKGF RRHKEKPSSE SCTKFKEIDM
     MTCAVHPIFG DVAAERQSIL DKIATLKPKQ TIFEYRDKKC KGNISETAYA ANVMRTLREK
     NAEQIEKFKA IKQKKIENTL IAAEKSDDYI PYVRESDAAD QHLGINSFQS EAAEAMLNKQ
     LEPGQKPKAG RVWDRKRKKF VTNQVEQEKK IKTESGNWIK QSFKTGKYTE YLEKSKAGLL
     ADDSGDEDAN KNNTEQSRQN RQALTNLIHR RTRGGGKKAQ AREQGGLKRP EQILRERKDR
     DREMAKQGIR GRGGSRGRGG SRGGSRGGFG GSRGGFGGGR GGRGGGSRAE AAAEEAVAEV
     VEEDNTHMFR FTSTSRILLY
//
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