ID E5SQ83_TRISP Unreviewed; 422 AA.
AC E5SQ83;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE SubName: Full=AP-1 complex subunit mu-1 {ECO:0000313|EMBL:KRY30289.1};
GN Name=AP1M1 {ECO:0000313|EMBL:KRY30289.1};
GN ORFNames=T01_12240 {ECO:0000313|EMBL:KRY30289.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY30289.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY30289.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY30289.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the adaptor complexes medium subunit family.
CC {ECO:0000256|PIRNR:PIRNR005992}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY30289.1}.
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DR EMBL; JYDH01000145; KRY30289.1; -; Genomic_DNA.
DR RefSeq; XP_003372804.1; XM_003372756.1.
DR AlphaFoldDB; E5SQ83; -.
DR STRING; 6334.E5SQ83; -.
DR EnsemblMetazoa; EFV53037; EFV53037; EFV53037.
DR GeneID; 10902257; -.
DR KEGG; tsp:Tsp_10366; -.
DR CTD; 10902257; -.
DR eggNOG; KOG0937; Eukaryota.
DR HOGENOM; CLU_026996_0_0_1; -.
DR InParanoid; E5SQ83; -.
DR OMA; KPLIWCD; -.
DR OrthoDB; 6959at2759; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0030131; C:clathrin adaptor complex; IEA:UniProtKB-UniRule.
DR GO; GO:0045176; P:apical protein localization; IEA:EnsemblMetazoa.
DR GO; GO:0060271; P:cilium assembly; IEA:EnsemblMetazoa.
DR GO; GO:0009792; P:embryo development ending in birth or egg hatching; IEA:EnsemblMetazoa.
DR GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR GO; GO:0002119; P:nematode larval development; IEA:EnsemblMetazoa.
DR GO; GO:0097500; P:receptor localization to non-motile cilium; IEA:EnsemblMetazoa.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR CDD; cd09258; AP-1_Mu1A_Cterm; 1.
DR CDD; cd14835; AP1_Mu_N; 1.
DR Gene3D; 3.30.450.60; -; 1.
DR Gene3D; 2.60.40.1170; Mu homology domain, subdomain B; 2.
DR InterPro; IPR036168; AP2_Mu_C_sf.
DR InterPro; IPR022775; AP_mu_sigma_su.
DR InterPro; IPR001392; Clathrin_mu.
DR InterPro; IPR018240; Clathrin_mu_CS.
DR InterPro; IPR011012; Longin-like_dom_sf.
DR InterPro; IPR028565; MHD.
DR PANTHER; PTHR10529:SF262; ADAPTOR PROTEIN COMPLEX 1, MU SUBUNIT; 1.
DR PANTHER; PTHR10529; AP COMPLEX SUBUNIT MU; 1.
DR Pfam; PF00928; Adap_comp_sub; 1.
DR Pfam; PF01217; Clat_adaptor_s; 1.
DR PIRSF; PIRSF005992; Clathrin_mu; 1.
DR PRINTS; PR00314; CLATHRINADPT.
DR SUPFAM; SSF49447; Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; 1.
DR SUPFAM; SSF64356; SNARE-like; 1.
DR PROSITE; PS00990; CLAT_ADAPTOR_M_1; 1.
DR PROSITE; PS51072; MHD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927,
KW ECO:0000256|PIRNR:PIRNR005992};
KW Reference proteome {ECO:0000313|Proteomes:UP000054776};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR005992}.
FT DOMAIN 167..420
FT /note="MHD"
FT /evidence="ECO:0000259|PROSITE:PS51072"
SQ SEQUENCE 422 AA; 48779 MW; 2AD3ABC5281DFF36 CRC64;
MSCSAVFFLD LKGKVIISRN YRGDVDMTLI EKFMPLLMDK EEEGCATPIL YQQEATFIYV
KHTNLYLVAM CRKNSNAALV FAFLYKIIDV FTEYFKELEE ESIRDNFVVI YELFDELMDF
GYPQTTDGKI LQEYITQEGH KLEVQPRPPM AVTNAVSWRT EGIKYRKNEV FLDVVESVNL
LANASGNVLR SEIVGSVKMR VFLSGMPELR LGLNDKILFE STGRGRTKSV ELEDVKFHQC
VRLSRFENDR TISFIPPDDE FELMSYRLTT NVKPLIWIES VINVHRHSRI DYMIKAKSQF
KRRSTANNVE IIIPVPSDAD SPKFKTSVGS VKYYPEQSAF HWFIKAFPGG KEYLMRAHFG
LPSVEGEVTE GRPPIKVKFE IPYFTVSGIQ VRYLKIIEKS GYQALPWVRY ITQNGEYELR
IG
//