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Database: UniProt
Entry: E5SQ83_TRISP
LinkDB: E5SQ83_TRISP
Original site: E5SQ83_TRISP 
ID   E5SQ83_TRISP            Unreviewed;       422 AA.
AC   E5SQ83;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=AP-1 complex subunit mu-1 {ECO:0000313|EMBL:KRY30289.1};
GN   Name=AP1M1 {ECO:0000313|EMBL:KRY30289.1};
GN   ORFNames=T01_12240 {ECO:0000313|EMBL:KRY30289.1};
OS   Trichinella spiralis (Trichina worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY30289.1, ECO:0000313|Proteomes:UP000054776};
RN   [1] {ECO:0000313|EMBL:KRY30289.1, ECO:0000313|Proteomes:UP000054776}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS3 {ECO:0000313|EMBL:KRY30289.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the adaptor complexes medium subunit family.
CC       {ECO:0000256|PIRNR:PIRNR005992}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY30289.1}.
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DR   EMBL; JYDH01000145; KRY30289.1; -; Genomic_DNA.
DR   RefSeq; XP_003372804.1; XM_003372756.1.
DR   AlphaFoldDB; E5SQ83; -.
DR   STRING; 6334.E5SQ83; -.
DR   EnsemblMetazoa; EFV53037; EFV53037; EFV53037.
DR   GeneID; 10902257; -.
DR   KEGG; tsp:Tsp_10366; -.
DR   CTD; 10902257; -.
DR   eggNOG; KOG0937; Eukaryota.
DR   HOGENOM; CLU_026996_0_0_1; -.
DR   InParanoid; E5SQ83; -.
DR   OMA; KPLIWCD; -.
DR   OrthoDB; 6959at2759; -.
DR   Proteomes; UP000054776; Unassembled WGS sequence.
DR   GO; GO:0030131; C:clathrin adaptor complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0045176; P:apical protein localization; IEA:EnsemblMetazoa.
DR   GO; GO:0060271; P:cilium assembly; IEA:EnsemblMetazoa.
DR   GO; GO:0009792; P:embryo development ending in birth or egg hatching; IEA:EnsemblMetazoa.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0002119; P:nematode larval development; IEA:EnsemblMetazoa.
DR   GO; GO:0097500; P:receptor localization to non-motile cilium; IEA:EnsemblMetazoa.
DR   GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR   CDD; cd09258; AP-1_Mu1A_Cterm; 1.
DR   CDD; cd14835; AP1_Mu_N; 1.
DR   Gene3D; 3.30.450.60; -; 1.
DR   Gene3D; 2.60.40.1170; Mu homology domain, subdomain B; 2.
DR   InterPro; IPR036168; AP2_Mu_C_sf.
DR   InterPro; IPR022775; AP_mu_sigma_su.
DR   InterPro; IPR001392; Clathrin_mu.
DR   InterPro; IPR018240; Clathrin_mu_CS.
DR   InterPro; IPR011012; Longin-like_dom_sf.
DR   InterPro; IPR028565; MHD.
DR   PANTHER; PTHR10529:SF262; ADAPTOR PROTEIN COMPLEX 1, MU SUBUNIT; 1.
DR   PANTHER; PTHR10529; AP COMPLEX SUBUNIT MU; 1.
DR   Pfam; PF00928; Adap_comp_sub; 1.
DR   Pfam; PF01217; Clat_adaptor_s; 1.
DR   PIRSF; PIRSF005992; Clathrin_mu; 1.
DR   PRINTS; PR00314; CLATHRINADPT.
DR   SUPFAM; SSF49447; Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; 1.
DR   SUPFAM; SSF64356; SNARE-like; 1.
DR   PROSITE; PS00990; CLAT_ADAPTOR_M_1; 1.
DR   PROSITE; PS51072; MHD; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927,
KW   ECO:0000256|PIRNR:PIRNR005992};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054776};
KW   Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR005992}.
FT   DOMAIN          167..420
FT                   /note="MHD"
FT                   /evidence="ECO:0000259|PROSITE:PS51072"
SQ   SEQUENCE   422 AA;  48779 MW;  2AD3ABC5281DFF36 CRC64;
     MSCSAVFFLD LKGKVIISRN YRGDVDMTLI EKFMPLLMDK EEEGCATPIL YQQEATFIYV
     KHTNLYLVAM CRKNSNAALV FAFLYKIIDV FTEYFKELEE ESIRDNFVVI YELFDELMDF
     GYPQTTDGKI LQEYITQEGH KLEVQPRPPM AVTNAVSWRT EGIKYRKNEV FLDVVESVNL
     LANASGNVLR SEIVGSVKMR VFLSGMPELR LGLNDKILFE STGRGRTKSV ELEDVKFHQC
     VRLSRFENDR TISFIPPDDE FELMSYRLTT NVKPLIWIES VINVHRHSRI DYMIKAKSQF
     KRRSTANNVE IIIPVPSDAD SPKFKTSVGS VKYYPEQSAF HWFIKAFPGG KEYLMRAHFG
     LPSVEGEVTE GRPPIKVKFE IPYFTVSGIQ VRYLKIIEKS GYQALPWVRY ITQNGEYELR
     IG
//
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