ID E6NU95_JATCU Unreviewed; 312 AA.
AC E6NU95;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=JHL06B08.6 protein {ECO:0000313|EMBL:BAJ53205.1};
GN Name=JHL06B08.6 {ECO:0000313|EMBL:BAJ53205.1};
GN ORFNames=JCGZ_21113 {ECO:0000313|EMBL:KDP26080.1};
OS Jatropha curcas (Barbados nut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae;
OC Jatropha.
OX NCBI_TaxID=180498 {ECO:0000313|EMBL:BAJ53205.1};
RN [1] {ECO:0000313|EMBL:BAJ53205.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Palawan {ECO:0000313|EMBL:BAJ53205.1};
RX PubMed=21149391; DOI=10.1093/dnares/dsq030;
RA Sato S., Hirakawa H., Isobe S., Fukai E., Watanabe A., Kato M.,
RA Kawashima K., Minami C., Muraki A., Nakazaki N., Takahashi C., Nakayama S.,
RA Kishida Y., Kohara M., Yamada M., Tsuruoka H., Sasamoto S., Tabata S.,
RA Aizu T., Toyoda A., Shin-I T., Minakuchi Y., Kohara Y., Fujiyama A.,
RA Tsuchimoto S., Kajiyama S., Makigano E., Ohmido N., Shibagaki N.,
RA Cartagena J.A., Wada N., Kohinata T., Atefeh A., Yuasa S., Matsunaga S.,
RA Fukui K.;
RT "Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas
RT L.";
RL DNA Res. 18:65-76(2011).
RN [2] {ECO:0000313|EMBL:KDP26080.1, ECO:0000313|Proteomes:UP000027138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. GZQX0401 {ECO:0000313|Proteomes:UP000027138};
RC TISSUE=Young leaves {ECO:0000313|EMBL:KDP26080.1};
RX PubMed=24837971; DOI=10.1371/journal.pone.0097878;
RA Zhang L., Zhang C., Wu P., Chen Y., Li M., Jiang H., Wu G.;
RT "Global Analysis of Gene Expression Profiles in Physic Nut (Jatropha curcas
RT L.) Seedlings Exposed to Salt Stress.";
RL PLoS ONE 9:E97878-E97878(2014).
CC -!- SIMILARITY: Belongs to the TFIIB family.
CC {ECO:0000256|ARBA:ARBA00010857}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP011969; BAJ53205.1; -; Genomic_DNA.
DR EMBL; KK914930; KDP26080.1; -; Genomic_DNA.
DR RefSeq; XP_012086204.1; XM_012230814.1.
DR STRING; 180498.E6NU95; -.
DR GeneID; 105645256; -.
DR KEGG; jcu:105645256; -.
DR OrthoDB; 38673at2759; -.
DR Proteomes; UP000027138; Unassembled WGS sequence.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd20551; CYCLIN_TFIIB_rpt1; 1.
DR Gene3D; 1.10.472.170; -; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 1.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR023486; TFIIB_CS.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618:SF78; CYCLIN FAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS00782; TFIIB; 1.
DR PROSITE; PS51134; ZF_TFIIB; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Reference proteome {ECO:0000313|Proteomes:UP000027138};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00469}.
FT DOMAIN 2..34
FT /note="TFIIB-type"
FT /evidence="ECO:0000259|PROSITE:PS51134"
SQ SEQUENCE 312 AA; 34087 MW; 06B270E180AE25E9 CRC64;
MGDAFCSDCK RQTEVVFDHS AGDTVCSECG LVLESHSIDE TSEWRTFANE SGDNDPVRVG
GPTNPLLADG GLSTVIAKPN GASGEFLSSS LGRWQNRGSN PDRGLILAFK TIATMSDRLG
LVATIKDRAN EIYKKVEDQK SSRGRNQDAL LAACLYIACR QEDKPRTVKE ICSVANGATK
KEIGRAKEYI VKQLGLETGQ SVEMGTIHAG DFMRRFCSNL GMNNQAMKAA QEAVQKSEEF
DIRRSPISIA AAVIYIISQL SDDKKPLREI SQATGVAEGT IRNSYKDLYP HVSKIIPGWY
AKEEDLKNLC SP
//
