ID E6UXG2_VARPE Unreviewed; 244 AA.
AC E6UXG2;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Helix-turn-helix domain protein {ECO:0000313|EMBL:ADU39952.1};
GN OrderedLocusNames=Varpa_5800 {ECO:0000313|EMBL:ADU39952.1};
OS Variovorax paradoxus (strain EPS).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU39952.1, ECO:0000313|Proteomes:UP000008917};
RN [1] {ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT "Complete sequence of Variovorax paradoxus EPS.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADU39952.1, ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|EMBL:ADU39952.1,
RC ECO:0000313|Proteomes:UP000008917};
RX PubMed=24158554;
RA Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT paradoxus Strain EPS.";
RL Genome Announc. 1:e00843-e00813(2013).
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DR EMBL; CP002417; ADU39952.1; -; Genomic_DNA.
DR RefSeq; WP_013544144.1; NC_014931.1.
DR AlphaFoldDB; E6UXG2; -.
DR STRING; 595537.Varpa_5800; -.
DR KEGG; vpe:Varpa_5800; -.
DR eggNOG; COG3655; Bacteria.
DR HOGENOM; CLU_090969_1_0_4; -.
DR OrthoDB; 5298444at2; -.
DR Proteomes; UP000008917; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF13443; HTH_26; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
PE 4: Predicted;
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|SMART:SM00530"
SQ SEQUENCE 244 AA; 27953 MW; 7BAD2776294D9848 CRC64;
MSTTVDLVLA LKNELKNARM TYADLARSLD MAESSVKRML AKSDMPLSRV DAICRALKID
FAELARRVAD AQPLLKELTQ EQEKAVVKDK KLLLVAISVL SQWTLEQIVT AYRISEAECI
GCLAQLDRIG IIELRPLNRY RLKLAKTFRW RPHGPVMEFF RENVVLDYYR GGFDGPAEGL
LLVHGSISRS LAPAFLERLQ RVAQDFAQQH QTDQKLSAKD REGYTLLLGM RNWEFELFTR
LRRA
//
