ID E6V3P6_VARPE Unreviewed; 403 AA.
AC E6V3P6;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Integrase family protein {ECO:0000313|EMBL:ADU36920.1};
GN OrderedLocusNames=Varpa_2722 {ECO:0000313|EMBL:ADU36920.1};
OS Variovorax paradoxus (strain EPS).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU36920.1, ECO:0000313|Proteomes:UP000008917};
RN [1] {ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT "Complete sequence of Variovorax paradoxus EPS.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADU36920.1, ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|EMBL:ADU36920.1,
RC ECO:0000313|Proteomes:UP000008917};
RX PubMed=24158554;
RA Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT paradoxus Strain EPS.";
RL Genome Announc. 1:e00843-e00813(2013).
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; CP002417; ADU36920.1; -; Genomic_DNA.
DR RefSeq; WP_013541149.1; NC_014931.1.
DR AlphaFoldDB; E6V3P6; -.
DR STRING; 595537.Varpa_2722; -.
DR KEGG; vpe:Varpa_2722; -.
DR eggNOG; COG0582; Bacteria.
DR HOGENOM; CLU_027562_0_0_4; -.
DR OrthoDB; 9775880at2; -.
DR Proteomes; UP000008917; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00801; INT_P4_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT DOMAIN 202..381
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 403 AA; 45080 MW; C2B99155C61D542F CRC64;
MALTDMAARK AKPEVRSYNL TDGAGLYLQV TPAGGKLWRW NYRHDGKQKT MAFGSYPEVS
IADAREAHQA ARKQKAAGAD PMAQRKLDKI AGVMAREHSF KAIAQQWHDQ WKPNKAERHA
RIVWGRLEND VFPAIGARPI SEVKPSELVA MIKKIAGRGA PDMAKRCLEI SGQVFRYAVA
HGISERNPAA DIKPGDVLPP RKTNHFARVE SSELPDLLRK IEAYSGTPAT RLAMKLMAYT
FVRTGELIGA RWPEFDLDAA VWRIPPERMK MKTLHIVPLS TQAVEVLRTL QLVTGDSALL
FPGERDHEKS ISNNTILGAL KRMGYAGRMT GHGFRGVAST ELHEMGFEEA HIEAQMSHLK
RNRVASAYDH SKYLKQRVAM MQTWADRLDQ FRAGAKILPF KAA
//
