GenomeNet

Database: UniProt
Entry: E6V7C6_VARPE
LinkDB: E6V7C6_VARPE
Original site: E6V7C6_VARPE 
ID   E6V7C6_VARPE            Unreviewed;       306 AA.
AC   E6V7C6;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   SubName: Full=Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADU39495.1};
GN   OrderedLocusNames=Varpa_5339 {ECO:0000313|EMBL:ADU39495.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU39495.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU39495.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU39495.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT   paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-e00813(2013).
CC   -!- SIMILARITY: Belongs to the HMG-CoA lyase family.
CC       {ECO:0000256|ARBA:ARBA00009405}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002417; ADU39495.1; -; Genomic_DNA.
DR   RefSeq; WP_013543697.1; NC_014931.1.
DR   AlphaFoldDB; E6V7C6; -.
DR   STRING; 595537.Varpa_5339; -.
DR   KEGG; vpe:Varpa_5339; -.
DR   eggNOG; COG0119; Bacteria.
DR   HOGENOM; CLU_022138_3_2_4; -.
DR   OrthoDB; 9784013at2; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016833; F:oxo-acid-lyase activity; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   CDD; cd07938; DRE_TIM_HMGL; 1.
DR   Gene3D; 3.20.20.70; Aldolase class I; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR043594; HMGL.
DR   InterPro; IPR000891; PYR_CT.
DR   PANTHER; PTHR42738; HYDROXYMETHYLGLUTARYL-COA LYASE; 1.
DR   PANTHER; PTHR42738:SF7; HYDROXYMETHYLGLUTARYL-COA LYASE; 1.
DR   Pfam; PF00682; HMGL-like; 1.
DR   SUPFAM; SSF51569; Aldolase; 1.
DR   PROSITE; PS50991; PYR_CT; 1.
PE   3: Inferred from homology;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Pyruvate {ECO:0000313|EMBL:ADU39495.1};
KW   Transferase {ECO:0000313|EMBL:ADU39495.1}.
FT   DOMAIN          7..278
FT                   /note="Pyruvate carboxyltransferase"
FT                   /evidence="ECO:0000259|PROSITE:PS50991"
SQ   SEQUENCE   306 AA;  32594 MW;  5D9BFFFD7110EBD3 CRC64;
     MKLPTRVKLV DVGPRDGLQN EKQPVSAEVK IGLVHRLQDA GLNEIEVTSF VSPKWVPQMA
     DNAEVMHGIQ RKPGVLYSVL TPNMKGFEAA IAAPREEWPD EIVVFGAASE AFSQKNINCS
     IAESIERFAP VVAAALEKGI RVRGAMSCTV GCPYEGEIAP AKVGYLAQLM KGIGVQRVDV
     ADTIGVGTPR KVQAAMEATL AHFEVDAISG HFHDTYGQAL VNTLAALEMG VWNFQSSSAG
     LGGCPYAKGA TGNVATEDVV YMLRGMGIET GIDLDKLIDA GVYISEALGR EPNSRASKAI
     RTKRAG
//
DBGET integrated database retrieval system