GenomeNet

Database: UniProt
Entry: E6WYG5_NITSE
LinkDB: E6WYG5_NITSE
Original site: E6WYG5_NITSE 
ID   E6WYG5_NITSE            Unreviewed;       246 AA.
AC   E6WYG5;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   27-MAR-2024, entry version 60.
DE   RecName: Full=Probable transcriptional regulatory protein Nitsa_1224 {ECO:0000256|HAMAP-Rule:MF_00693};
GN   OrderedLocusNames=Nitsa_1224 {ECO:0000313|EMBL:ADV46477.1};
OS   Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).
OC   Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC   Sulfurovaceae; Nitratifractor.
OX   NCBI_TaxID=749222 {ECO:0000313|EMBL:ADV46477.1, ECO:0000313|Proteomes:UP000008633};
RN   [1] {ECO:0000313|EMBL:ADV46477.1, ECO:0000313|Proteomes:UP000008633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16511 / JCM 12458 / E9I37-1
RC   {ECO:0000313|Proteomes:UP000008633};
RX   PubMed=21886859;
RA   Anderson I., Sikorski J., Zeytun A., Nolan M., Lapidus A., Lucas S.,
RA   Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L.,
RA   Pitluck S., Liolios K., Pagani I., Ivanova N., Huntemann M., Mavromatis K.,
RA   Ovchinikova G., Pati A., Chen A., Palaniappan K., Land M., Hauser L.,
RA   Brambilla E.M., Ngatchou-Djao O.D., Rohde M., Tindall B.J., Goker M.,
RA   Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Klenk H.P., Kyrpides N.C.;
RT   "Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-
RT   1).";
RL   Stand. Genomic Sci. 4:322-330(2011).
RN   [2] {ECO:0000313|Proteomes:UP000008633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16511 / JCM 12458 / E9I37-1
RC   {ECO:0000313|Proteomes:UP000008633};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA   Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Zeytun A.,
RA   Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Schuetze A.,
RA   Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Nitratifractor salsuginis DSM 16511.";
RL   Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC   -!- SIMILARITY: Belongs to the TACO1 family.
CC       {ECO:0000256|ARBA:ARBA00008724, ECO:0000256|HAMAP-Rule:MF_00693}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002452; ADV46477.1; -; Genomic_DNA.
DR   RefSeq; WP_013554168.1; NC_014935.1.
DR   AlphaFoldDB; E6WYG5; -.
DR   STRING; 749222.Nitsa_1224; -.
DR   KEGG; nsa:Nitsa_1224; -.
DR   eggNOG; COG0217; Bacteria.
DR   HOGENOM; CLU_062974_3_0_7; -.
DR   OrthoDB; 9781053at2; -.
DR   Proteomes; UP000008633; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.200; -; 1.
DR   Gene3D; 3.30.70.980; -; 2.
DR   HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR   InterPro; IPR017856; Integrase-like_N.
DR   InterPro; IPR048300; TACO1_YebC-like_2nd/3rd_dom.
DR   InterPro; IPR049083; TACO1_YebC_N.
DR   InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR   InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR   InterPro; IPR029072; YebC-like.
DR   NCBIfam; TIGR01033; YebC/PmpR family DNA-binding transcriptional regulator; 1.
DR   PANTHER; PTHR12532:SF6; TRANSCRIPTIONAL REGULATORY PROTEIN YEBC-RELATED; 1.
DR   PANTHER; PTHR12532; UNCHARACTERIZED; 1.
DR   Pfam; PF20772; TACO1_YebC_N; 1.
DR   Pfam; PF01709; Transcrip_reg; 1.
DR   SUPFAM; SSF75625; YebC-like; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00693};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00693};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008633};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW   Rule:MF_00693};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW   Rule:MF_00693}.
FT   DOMAIN          4..72
FT                   /note="TACO1/YebC-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF20772"
FT   DOMAIN          81..245
FT                   /note="TACO1/YebC-like second and third"
FT                   /evidence="ECO:0000259|Pfam:PF01709"
SQ   SEQUENCE   246 AA;  27652 MW;  21EDF15184B49BDA CRC64;
     MGRAFEYRKA AKLKRWGQMS RIFPKLGRMI TIAAKEGGSP DPEMNAKLRT AIANAKAQNM
     PKENIEAAIK RAFNKDAADI KEIAYEAKGP HGTLMYIECA TDNPTRTVAN VKAILVRNGG
     ELLTSGSLDF MFSRKAVFEF DKKPDLDLEE LELDLIDYGL EEIEEDKIPQ ENGEDKEIIR
     LYGDYKDFGS LSKALEERGI EVTKAQLQRI PSTPLELSDE EMDDVTNLVD KLEDDDDVQV
     VYTNLA
//
DBGET integrated database retrieval system