ID E6ZU33_SPORE Unreviewed; 1294 AA.
AC E6ZU33;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 13-SEP-2023, entry version 41.
DE RecName: Full=RNA polymerase II assembly factor Rtp1 C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=sr10470 {ECO:0000313|EMBL:CBQ70740.1};
OS Sporisorium reilianum (strain SRZ2) (Maize head smut fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium.
OX NCBI_TaxID=999809 {ECO:0000313|EMBL:CBQ70740.1, ECO:0000313|Proteomes:UP000008867};
RN [1] {ECO:0000313|EMBL:CBQ70740.1, ECO:0000313|Proteomes:UP000008867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SRZ2 {ECO:0000313|Proteomes:UP000008867};
RX PubMed=21148393; DOI=10.1126/science.1195330;
RA Schirawski J., Mannhaupt G., Muench K., Brefort T., Schipper K.,
RA Doehlemann G., Di Stasio M., Roessel N., Mendoza-Mendoza A., Pester D.,
RA Mueller O., Winterberg B., Meyer E., Ghareeb H., Wollenberg T.,
RA Muensterkoetter M., Wong P., Walter M., Stukenbrock E., Gueldener U.,
RA Kahmann R.;
RT "Pathogenicity determinants in smut fungi revealed by genome comparison.";
RL Science 330:1546-1548(2010).
CC -!- SIMILARITY: Belongs to the Tango6 family.
CC {ECO:0000256|ARBA:ARBA00005724}.
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DR EMBL; FQ311441; CBQ70740.1; -; Genomic_DNA.
DR EnsemblFungi; CBQ70740; CBQ70740; sr10470.
DR VEuPathDB; FungiDB:sr10470; -.
DR eggNOG; KOG4653; Eukaryota.
DR HOGENOM; CLU_005991_0_0_1; -.
DR OrthoDB; 1424255at2759; -.
DR Proteomes; UP000008867; Chromosome 2.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR019451; Rtp1_C1.
DR InterPro; IPR019414; Rtp1_C2.
DR InterPro; IPR039600; TANGO6/Rtp1.
DR PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR Pfam; PF10363; RTP1_C1; 1.
DR Pfam; PF10304; RTP1_C2; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
FT DOMAIN 927..1054
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10363"
FT DOMAIN 1248..1277
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10304"
FT REGION 804..831
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1294 AA; 138259 MW; 8D0194CC1640099E CRC64;
MTDPASSSDT SYRNSLHQAL HASRILTGTL DDELGIQKGA KTTKLGAQHQ LGNETALNAT
LSDRLRHAIA ADDELSSFQL HSDPQVATGD LALHLLSLIH AFLIQKKQDI DSRVAVQDER
LPALKRKGVQ PTEDVGLGVK DVKLVTTLQS LASKWALSTR IKAYDEALFA LAPKGFSPAN
KSNSSDKLTS NNRFQEIDED AEAQQRTTAR TAFNSARTDL FGVVKKCMSI LMSHASTSAT
GGPLHATTDV VTVMLRVGIV DYLSSLLRLG FGPSVAQGAA ATPTKDSIQK QTAAATTQLL
RFLSTHSAMS ALSSVIAHSD AKFGAPSFVK AVSSRLLSAQ LLRPDGVRSL FIITFGGSDL
AEAAELEGQN DAAGTGSAAP GTNSLKRFEQ CARLLLTPPQ GMPIDVYMPV ILPNLLDILS
PDLSTSSTVT PPPQEQMRAA GFVLTRISER HAHLFSKAVH DRVYSKFSPP TKIAAPESDS
TVVTAPEHLD RAISTLSSFL LFSEPSPTFF TMLFEPILPQ LLTLCNYLHA PKRHAGKGKV
RSLEAGGHID RLKVEVSNFL KTWVRLVDAK HGAASLMQSI QAAERGIGST QSGSASDQQG
FFWSQEPDGI SIRYGTSPTQ HEQDISTLLK DLSLAALAKQ ISAGNTDELD LTKIAPDLSA
KLGLQPGPRL LANLLKAADR KDLARLLLPS VLDVYMAQKT ASRARLVGGD DGASSETRSV
LYLQLILQLF DAFGSDLLQG DVPATLAFID FSLSSPSQRS KVTLQPKDTS EADIEMPFIS
AKSSASKPAI PSLFNIAAET NDSAASKDEN VKPVEMEGDD GVEEDEGDDD DEELVSTALS
LLLSLLESDT SLSSETQPML VVIADKIESL LDSGSGEIRS LAKEAKLVLM ARRSSIRGVP
PAANKNSTST SETSAKALAY AQAQETYQEA LKLLQDPILP VRAHGLVLLR RLVSDDAKHG
GQHVERVDPA LVPAILDIFL HAVQDEESYL YLNAVQGLAA LASSGGGQTI ARLVAIYVGR
DDGLASHGLA SREVEKRLRV GEALLQVVQR CGDAMGAHVD AVVPPLLAKL RDRALANVLR
SSFVSILGTV VEAAPVAMAS RGYAAQLAQV CIDIVVIEMV QRPNAPLKGP VTLNVQGKRI
FDPTEDDEEK HKAQAHAQRA LDSATNSDAK IAHLRRAAML LLTLLVRGTR FQLEEREGAE
GGKLVEKLSA LRLPGGGILP SVSAPGDGVV QAKQELGTKD LLFPPSLLER LKQVAAYVEA
GDTDAIVRTH AHDCLEHADA LLLDLVSSGL SLSR
//