ID E7EX21_HUMAN Unreviewed; 582 AA.
AC E7EX21;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE SubName: Full=Collagen type XIII alpha 1 chain {ECO:0000313|Ensembl:ENSP00000430089.1};
GN Name=COL13A1 {ECO:0000313|Ensembl:ENSP00000430089.1};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000430089.1, ECO:0000313|Proteomes:UP000005640};
RN [1] {ECO:0000313|Ensembl:ENSP00000430089.1, ECO:0000313|Proteomes:UP000005640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15164054; DOI=10.1038/nature02462;
RA Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L.,
RA Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K.,
RA Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L.,
RA Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P.,
RA Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J.,
RA Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y.,
RA Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P.,
RA Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N.,
RA Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A.,
RA Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C.,
RA Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D.,
RA Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C.,
RA Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K.,
RA Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A.,
RA Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S.,
RA McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S.,
RA Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V.,
RA Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A.,
RA Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M.,
RA Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A.,
RA Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P.,
RA Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y.,
RA Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D.,
RA Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.;
RT "The DNA sequence and comparative analysis of human chromosome 10.";
RL Nature 429:375-381(2004).
RN [2] {ECO:0000313|Ensembl:ENSP00000430089.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AC024601; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC025426; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AL138925; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; E7EX21; -.
DR MassIVE; E7EX21; -.
DR PeptideAtlas; E7EX21; -.
DR ProteomicsDB; 18963; -.
DR Ensembl; ENST00000479733.5; ENSP00000430089.1; ENSG00000197467.17.
DR UCSC; uc057tui.1; human.
DR HGNC; HGNC:2190; COL13A1.
DR VEuPathDB; HostDB:ENSG00000197467; -.
DR GeneTree; ENSGT00940000154865; -.
DR ChiTaRS; COL13A1; human.
DR Proteomes; UP000005640; Chromosome 10.
DR Bgee; ENSG00000197467; Expressed in cerebellar hemisphere and 151 other cell types or tissues.
DR ExpressionAtlas; E7EX21; baseline and differential.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR37456:SF4; COLLAGEN ALPHA-1(XIII) CHAIN ISOFORM X2; 1.
DR PANTHER; PTHR37456; SI:CH211-266K2.1; 1.
DR Pfam; PF01391; Collagen; 6.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|MaxQB:E7EX21,
KW ECO:0007829|PeptideAtlas:E7EX21};
KW Reference proteome {ECO:0000313|Proteomes:UP000005640}.
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 105..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 268..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 472..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 116..130
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..315
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 515..529
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 582 AA; 57651 MW; 34FCE2BAFECF5C11 CRC64;
MVAERTHKAA ATGARGPGEL GAPGTVALVA ARAERGARLP SPGSCGLLTL ALCSLALSLL
AHFRTAELQA RVLRLEAERG EQQMETAILG RVNQLLDEKW KLHSRRRREA PKTSPGCNCP
PGPPGPTGRP GLPGDKGAIG MPGRVGVKGQ PGEKGSPGDA GLSIIGPRGP PGQPGTRGFP
GFPGPIGLDG KPGHPGPKGD MGLTGPPGQP GPQGQKGEKG QCGEYPHREC LSSMPAALRS
SQIIALKLLP LLNSVRLAPP PVIKRRTFQG EQSQASIQGP PGPPGPPGPS GPLGHPGLPG
PMGPPGLPGP PGPKGDPGIQ GYHGRKGERG MPGMPGKHGA KGAPGIAVAG MKGEPGIPGT
KGEKGAEGSP GLPGLLGQKG EKGDAGNSIG GGRGEPGPPG LPGPPGPKGE AGVDGQVGPP
GQPGDKGERG AAGEQGPDGP KGSKGEPGKG EMVDYNGNIN EALQEIRTLA LMGPPGLPGQ
IGPPGAPGIP GQKGEIGLPG PPGHDGEKGP RGKPGDMGPP GPQGPPGKDG PPGVKGENGH
PGSPGEKGEK GETGQAGSPG LDGPTGERRT WWPEQTQSGR IA
//
