ID E7GNX7_CLOSY Unreviewed; 671 AA.
AC E7GNX7;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=HMPREF9474_02622 {ECO:0000313|EMBL:EGA93525.1};
OS [Clostridium] symbiosum WAL-14163.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=742740 {ECO:0000313|EMBL:EGA93525.1, ECO:0000313|Proteomes:UP000002970};
RN [1] {ECO:0000313|EMBL:EGA93525.1, ECO:0000313|Proteomes:UP000002970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WAL-14163 {ECO:0000313|EMBL:EGA93525.1,
RC ECO:0000313|Proteomes:UP000002970};
RA Earl A., Ward D., Feldgarden M., Gevers D., Finegold S.M., Summanen P.H.,
RA Molitoris D.R., Vaisanen M.L., Daigneault M., Young S.K., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C.,
RA Freedman E., Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S.,
RA Heilman E., Heiman D., Howarth C., Larson L., Lui A., MacDonald P.J.P.,
RA Mehta T., Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M.,
RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S.,
RA White J., Yandava C., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium symbiosum strain WAL-14163.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGA93525.1}.
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DR EMBL; ADLQ01000056; EGA93525.1; -; Genomic_DNA.
DR RefSeq; WP_003501236.1; NZ_GL834311.1.
DR AlphaFoldDB; E7GNX7; -.
DR STRING; 1512.GCA_900049235_02824; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_8_7_9; -.
DR Proteomes; UP000002970; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR013668; RNase_R_HTH_12.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF08461; HTH_12; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002970}.
FT DOMAIN 336..561
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 671 AA; 76654 MW; D7049F134F92B2D1 CRC64;
MKKKVIIACT RRQVSEYIKI QLQELLGEYA EISMILVNQE PSCRIRCDLV IAISEEMAKQ
VSPMLMTDTE IIVLHLTIQR NMYDRLKEVD GERRAIVVNN TQELALETVA LLYALDMKNI
ELYPYYPGCT EDYSEIRLAI TPNEFPIIPD YIERVVDIGE RCLDPLTLIE VFSRLDYLNS
ETIEKIFTYG QNVISVNRGI TELTRNGHDF GFSQQQFVEG FGDAVLLLDD GKKISLLNTA
AQELFGEPYV CLIHRDISGV IPELERAVRL EMPILSNVPV TINGRKYLMT WNFFSDKMEG
SSVLVLKSFE EMRNLYARYG SERARKAELK YNFDDIIGSS RAMKQMKEKA RRFAETEFPI
LIQGESGTGK ELLAQAIHQA SGRKEGPFIA FNCASLSDSL LESELFGYHE GAFTGASKKG
RPGIFEMASG GTLFMDEIGD VSLNMQAKIL RVLQEQEVVR VGGSQVIPVD VRIISATNQD
LLMFVKEKRF RLDLYYRLNT LILQTVPLRS RPKDIYDMLP CFFRKNHIKK NIDENAMKFM
LDYPWPGNVR EFQNCISYLS IVDHDTIRVE DFPEYILGET SLRKSDDYQE IPVEVAILEE
LSTVRRKGEK AGRKKLADSL KKRGVLITEA EIRVYLERLQ ESGFIEIHKG RGGTQITAEG
IRRIGQNLHG D
//
