GenomeNet

Database: UniProt
Entry: E9H248_DAPPU
LinkDB: E9H248_DAPPU
Original site: E9H248_DAPPU 
ID   E9H248_DAPPU            Unreviewed;      1066 AA.
AC   E9H248;
DT   05-APR-2011, integrated into UniProtKB/TrEMBL.
DT   05-APR-2011, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   RecName: Full=ATP-dependent RNA helicase YTHDC2 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DAPPUDRAFT_307460 {ECO:0000313|EMBL:EFX74196.1};
OS   Daphnia pulex (Water flea).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC   Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX   NCBI_TaxID=6669 {ECO:0000313|EMBL:EFX74196.1, ECO:0000313|Proteomes:UP000000305};
RN   [1] {ECO:0000313|EMBL:EFX74196.1, ECO:0000313|Proteomes:UP000000305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21292972; DOI=10.1126/science.1197761;
RA   Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A.,
RA   Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., Bauer D.J.,
RA   Caceres C.E., Carmel L., Casola C., Choi J.H., Detter J.C., Dong Q.,
RA   Dusheyko S., Eads B.D., Frohlich T., Geiler-Samerotte K.A., Gerlach D.,
RA   Hatcher P., Jogdeo S., Krijgsveld J., Kriventseva E.V., Kultz D.,
RA   Laforsch C., Lindquist E., Lopez J., Manak J.R., Muller J., Pangilinan J.,
RA   Patwardhan R.P., Pitluck S., Pritham E.J., Rechtsteiner A., Rho M.,
RA   Rogozin I.B., Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y.,
RA   Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., Tu H.,
RA   Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., Shaw J.R.,
RA   Andrews J., Crease T.J., Tang H., Lucas S.M., Robertson H.M., Bork P.,
RA   Koonin E.V., Zdobnov E.M., Grigoriev I.V., Lynch M., Boore J.L.;
RT   "The ecoresponsive genome of Daphnia pulex.";
RL   Science 331:555-561(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GL732585; EFX74196.1; -; Genomic_DNA.
DR   AlphaFoldDB; E9H248; -.
DR   STRING; 6669.E9H248; -.
DR   EnsemblMetazoa; EFX74196; EFX74196; DAPPUDRAFT_307460.
DR   KEGG; dpx:DAPPUDRAFT_307460; -.
DR   eggNOG; KOG0920; Eukaryota.
DR   HOGENOM; CLU_001832_1_6_1; -.
DR   InParanoid; E9H248; -.
DR   PhylomeDB; E9H248; -.
DR   Proteomes; UP000000305; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   CDD; cd17917; DEXHc_RHA-like; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR18934:SF213; 3'-5' RNA HELICASE YTHDC2; 1.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00248; ANK; 2.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF48403; Ankyrin repeat; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000305}.
FT   DOMAIN          43..205
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          387..557
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
SQ   SEQUENCE   1066 AA;  119257 MW;  E3B4E0B67380746D CRC64;
     MNRIAGRLNL SDKPPYIPLF GESAVFVHHR RNLPIFKYRQ EILNQLECQQ VVVIAGNVGC
     GKTTQVPQYI LENAYEKKGA CRIISIQPRR LSVHAALDRV IAERGKLVGH QTRLESKGTV
     NCPLIFCTTG VFLRSLIEND RCLKGITHVI IDQVHERDRF TDLLLGVFRL RLSQYPDLRL
     ILLSADMAPH ALANYFHQEK IIRVPVSSTP VSQLFLEDIL TCTKFLSKQK LLTGAGGVKG
     ELTLGPANVF DDLITEAWYN GSDLIFLHIM KLVRDGAMPI DYQHSQTGIT VLMACANHGK
     LDIVKMAISL GADPTLQVKG MTSYDLANEF ARPEVADLLL SYSQVFYNEV GNNVVIQEPL
     TVNYNSPDDV LKSFYAKYSQ DHANLDLIIE VLNYVQGYSQ PGTILVLLPA YSEVVELRDM
     IIASTSSLKN KLEVHTLHGH LFPNDFKKIF CPAPADKRKV ILSTNIAETS ISFDDVICVI
     DSGLFRDREN DVVFTNPKKT QWISKASAAQ RVMHVRNGGI VFHLYPRSTL DGLQEYPVPE
     ITRDPLIDVC LFARLIIPED MRLPQFFCSL PDGPPTTAVH QAIEILESID AFDSQSKVTD
     VGLRLIDLSV EPRLGKILLV SVGLRCLDPV LTIICCLARD DPFITPVSPD ERKVAIMRRY
     DLAPDYLSDH LALLRAYHLW EKGNDEGRKR QVCQENYLSV ANIELVFLLR VLLVGELRAS
     GYVRSRGSAD IRNLNIHSES WTAIKAALTS GLYPNLARYS PTDGGIITQN ETRSQFHFTS
     TLLVQEGRNN GLGFVAASSA DSLPWVIFED QQRAGQFTVL RCCSVVTPIT ALLFAGHLGS
     EIQTVQLNQD ILGLNRVAKS NKRLSRPRKH FVILKIDEFI GFVVDSYVAQ LIMNTRKKFQ
     TILAKCIREP GRNCSVGEDG VLRTVLSLLS SEEMAMQVPQ PSGVGRRPTN VSADSMLVTP
     ELKPEELYPI RRYMAYTPPP KGYSYESHEY NNSFVTSGMG STASKNRIKP NRLNKTTDYR
     EVFPNPTPVP SMNLSFQGMP SVMPNVTPVR GRPLCKSYSY NYSEGN
//
DBGET integrated database retrieval system