ID E9HJF8_DAPPU Unreviewed; 847 AA.
AC E9HJF8;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN ORFNames=DAPPUDRAFT_114841 {ECO:0000313|EMBL:EFX68078.1};
OS Daphnia pulex (Water flea).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=6669 {ECO:0000313|EMBL:EFX68078.1, ECO:0000313|Proteomes:UP000000305};
RN [1] {ECO:0000313|EMBL:EFX68078.1, ECO:0000313|Proteomes:UP000000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21292972; DOI=10.1126/science.1197761;
RA Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A.,
RA Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., Bauer D.J.,
RA Caceres C.E., Carmel L., Casola C., Choi J.H., Detter J.C., Dong Q.,
RA Dusheyko S., Eads B.D., Frohlich T., Geiler-Samerotte K.A., Gerlach D.,
RA Hatcher P., Jogdeo S., Krijgsveld J., Kriventseva E.V., Kultz D.,
RA Laforsch C., Lindquist E., Lopez J., Manak J.R., Muller J., Pangilinan J.,
RA Patwardhan R.P., Pitluck S., Pritham E.J., Rechtsteiner A., Rho M.,
RA Rogozin I.B., Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y.,
RA Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., Tu H.,
RA Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., Shaw J.R.,
RA Andrews J., Crease T.J., Tang H., Lucas S.M., Robertson H.M., Bork P.,
RA Koonin E.V., Zdobnov E.M., Grigoriev I.V., Lynch M., Boore J.L.;
RT "The ecoresponsive genome of Daphnia pulex.";
RL Science 331:555-561(2011).
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DR EMBL; GL732662; EFX68078.1; -; Genomic_DNA.
DR AlphaFoldDB; E9HJF8; -.
DR EnsemblMetazoa; EFX68078; EFX68078; DAPPUDRAFT_114841.
DR KEGG; dpx:DAPPUDRAFT_114841; -.
DR HOGENOM; CLU_019800_0_0_1; -.
DR InParanoid; E9HJF8; -.
DR PhylomeDB; E9HJF8; -.
DR Proteomes; UP000000305; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR33223; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33223:SF6; TY3_CAPSID DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000000305};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 822..836
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 353..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 672..811
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 256..344
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 355..380
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 677..691
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 692..706
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 707..741
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 742..760
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 776..811
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 847 AA; 97450 MW; E79B287896C7339D CRC64;
MTTPTLPSSD TSFSVLNESL IGEVDLNEDQ YTNSLPHDVL QIREKFLLEW NSLIKLSQDV
ASDSSSTRRV TRSEILAKKK DISSKVYNSL KQYTYELFKK ELGGSQYITG DARDKVIANL
TTYLTQIKAD PLVFNPIVQE IKTAHSKEVD FRTKAFKLFK RELLFKQIYL ENYAKSLETQ
VDNQKDRTAK EVDKVRREFS KKLADALVEN TRLTAEIDDS TRANYLSKNL ITDLEKKLKT
QTSSDDKTLI LTKTELESTK QEVEVHKNTI SDLNKVIDKL KEDTKDTVAQ LTHNHKLLSD
EHESLKNACT TTDSEDVATK QVSVDSLRHT NQTLTNDIAA LQLQLTLQPV QVAPPTTMTP
APPTPPPKPP TPPPTTPPPS NLQQQIQTVR GGLRATTPNP DDVPVTKSHL RELYSQDERK
SIPVFKGKRG EQLINNWLKD AERVAQSAGW TPRDKIKYFP DRLRGDAADW HRDYMDRATN
KDDYDAWEKA LINRFLTESE VENLRKQLNE LRQGPDQSTQ TFVSRLNHLY DIIHGKEIVI
DETIAPPEAI ELARSLRKIR GEGKQKILLK GILPAIKKVV WTRIGVDSSY EDVCEITYAA
ETIVNRMEQN EDKSLQATIA GISAHEDEQD VELFRQKTKL SKLEKQMTVL KINPTTPQEA
PEVALPTVAI TEAYNRHRSP SGDRRRPNSE SRIRFQQPPP RPSQDTNYSR DRGRDNSYYR
SRSPGDNRYH QTVDSRSRRD QTPPRPNFSN NQPDRNNFQR TNNDSFRRRF PENTPYPSPR
QFQDRTPNNF QYRQTPYTGT RPRTTGNYNN QRDYRTRRDI ECYACGKRGH YARECRTNPP
ETPQQRQ
//
